Evidence map›Paper›PMID 28095508›Full record

ArticlePloS one2017

The Smc5/6 Complex Restricts HBV when Localized to ND10 without Inducing an Innate Immune Response and Is Counteracted by the HBV X Protein Shortly after Infection.

Congrong Niu, Christine M Livingston, Li Li, Rudolf K Beran, Stephane Daffis, Dhivya Ramakrishnan, Dara Burdette, Leanne Peiser, Eduardo Salas, Hilario Ramos and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 150 citations in OpenAlex.

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  19. Regulation of R-Loops in DNA Tumor Viruses.Pathogens (Basel, Switzerland) · 2024
    Review
  20. Article

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Congrong NiuGilead Sciences, Foster City, California, United States of America.
Christine M LivingstonGilead Sciences, Foster City, California, United States of America.
Li LiGilead Sciences, Foster City, California, United States of America.
Rudolf K BeranGilead Sciences, Foster City, California, United States of America.
Stephane DaffisGilead Sciences, Foster City, California, United States of America.
Dhivya RamakrishnanGilead Sciences, Foster City, California, United States of America.
Dara BurdetteGilead Sciences, Foster City, California, United States of America.
Leanne PeiserGilead Sciences, Foster City, California, United States of America.
Eduardo SalasGilead Sciences, Foster City, California, United States of America.
Hilario RamosGilead Sciences, Foster City, California, United States of America.
Mei YuGilead Sciences, Foster City, California, United States of America.
Guofeng ChengGilead Sciences, Foster City, California, United States of America.
Michel StrubinDepartment of Microbiology and Molecular Medicine, University Medical Center (C.M.U.), Geneva, Switzerland.
William E DelaneyGilead Sciences, Foster City, California, United States of America.
Simon P FletcherGilead Sciences, Foster City, California, United States of America.
Gilead Sciences (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The structural maintenance of chromosome 5/6 complex (Smc5/6) is a restriction factor that represses hepatitis B virus (HBV) transcription. HBV counters this restriction by expressing HBV X protein (HBx), which targets Smc5/6 for degradation. However, the mechanism by which Smc5/6 suppresses HBV transcription and how HBx is initially expressed is not known. In this study we characterized viral kinetics and the host response during HBV infection of primary human hepatocytes (PHH) to address these unresolved questions. We determined that Smc5/6 localizes with Nuclear Domain 10 (ND10) in PHH. Co-localization has functional implications since depletion of ND10 structural components alters the nuclear distribution of Smc6 and induces HBV gene expression in the absence of HBx. We also found that HBV infection and replication does not induce a prominent global host transcriptional response in PHH, either shortly after infection when Smc5/6 is present, or at later times post-infection when Smc5/6 has been degraded. Notably, HBV and an HBx-negative virus establish high level infection in PHH without inducing expression of interferon-stimulated genes or production of interferons or other cytokines. Our study also revealed that Smc5/6 is degraded in the majority of infected PHH by the time cccDNA transcription could be detected and that HBx RNA is present in cell culture-derived virus preparations as well as HBV patient plasma. Collectively, these data indicate that Smc5/6 is an intrinsic antiviral restriction factor that suppresses HBV transcription when localized to ND10 without inducing a detectable innate immune response. Our data also suggest that HBx protein may be initially expressed by delivery of extracellular HBx RNA into HBV-infected cells.

Indexed as

AnimalsAntigens, NuclearAutoantigensCell Cycle ProteinsCells, CulturedChromosomal Proteins, Non-HistoneCytokinesHepatitis BHepatitis B virusHepatocytesHumansImmunity, InnateMaleMiceMice, SCIDNuclear ProteinsAntigens, NuclearAutoantigensCALCOCO2 protein, humanCell Cycle ProteinsChromosomal Proteins, Non-HistoneCytokineshepatitis B virus X proteinNuclear ProteinsPML protein, humanPromyelocytic Leukemia ProteinSMC5 protein, humanSMC6 protein, humanSP100 protein, humanTrans-ActivatorsViral Regulatory and Accessory Proteins

Identifiers

PMID28095508
PMCPMC5240991
OpenAlexW2577159120

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.