Evidence map›Paper›PMID 28091569›Full record

ArticleScientific reports2017

Epigenetic regulation of Plasmodium falciparum clonally variant gene expression during development in Anopheles gambiae.

Elena Gómez-Díaz, Rakiswendé S Yerbanga, Thierry Lefèvre, Anna Cohuet, M Jordan Rowley, Jean Bosco Ouedraogo, Victor G Corces

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 112 citations in OpenAlex.

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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Elena Gómez-DíazDepartment of Biology, Emory University, 1510 Clifton Road NE, Atlanta, GA 30322, USA.
Rakiswendé S YerbangaInstitut de Recherche en Sciences de la Santé (IRSS), 01 BP 171 Bobo Dioulasso, Burkina Faso.
Thierry LefèvreInstitut de Recherche en Sciences de la Santé (IRSS), 01 BP 171 Bobo Dioulasso, Burkina Faso.
Anna CohuetInstitut de Recherche en Sciences de la Santé (IRSS), 01 BP 171 Bobo Dioulasso, Burkina Faso.
M Jordan RowleyDepartment of Biology, Emory University, 1510 Clifton Road NE, Atlanta, GA 30322, USA.
Jean Bosco OuedraogoInstitut de Recherche en Sciences de la Santé (IRSS), 01 BP 171 Bobo Dioulasso, Burkina Faso.
Victor G CorcesDepartment of Biology, Emory University, 1510 Clifton Road NE, Atlanta, GA 30322, USA.
Institut de Recherche en Sciences de la Santé · BFEmory University · US

Funding

MOLECULAR BASIS OF SUPPRESSION IN DROSOPHILAR01GM035463 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI CORCES, VICTOR G. · 1986 to 2020
$10.7M
NIGMS NIH HHS R01 GM035463
6 · The paper itself

Abstract

P. falciparum phenotypic plasticity is linked to the variant expression of clonal multigene families such as the var genes. We have examined changes in transcription and histone modifications that occur during sporogonic development of P. falciparum in the mosquito host. All var genes are silenced or transcribed at low levels in blood stages (gametocyte/ring) of the parasite in the human host. After infection of mosquitoes, a single var gene is selected for expression in the oocyst, and transcription of this gene increases dramatically in the sporozoite. The same PF3D7_1255200 var gene was activated in 4 different experimental infections. Transcription of this var gene during parasite development in the mosquito correlates with the presence of low levels of H3K9me3 at the binding site for the PF3D7_1466400 AP2 transcription factor. This chromatin state in the sporozoite also correlates with the expression of an antisense long non-coding RNA (lncRNA) that has previously been shown to promote var gene transcription during the intraerythrocytic cycle in vitro. Expression of both the sense protein-coding transcript and the antisense lncRNA increase dramatically in sporozoites. The findings suggest a complex process for the activation of a single particular var gene that involves AP2 transcription factors and lncRNAs.

Indexed as

Epigenesis, GeneticGene Expression RegulationAnimalsAnophelesBinding SitesGene Expression ProfilingGenes, ProtozoanHistonesHumansLife Cycle StagesMultigene FamilyPhenotypePlasmodium falciparumProtein BindingTranscription Factor AP-2TranscriptomeHistonesTranscription Factor AP-2

Identifiers

PMID28091569
PMCPMC5238449
OpenAlexW2578509236

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.