Evidence map›Paper›PMID 28090565›Full record

ArticleCellular and molecular gastroenterology and hepatology2016

Ellen A Tsai, Melissa A Gilbert, Christopher M Grochowski, Lara A Underkoffler, He Meng, Xiaojie Zhang, Michael M Wang, Hailu Shitaye, Kurt D Hankenson, David Piccoli and 5 more

Open access · goldAbstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Phenotypic Divergence of JAG1- and NOTCH2-Associated Alagille Syndrome & Disease-Specific NOTCH2 Variant Classification Guidelines.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Article
  3. Article
  4. Article
  5. Genetics of liver disease in adults.Hepatology communications · 2024
    Review
  6. International journal of general medicine · 2024
    Article
  7. JPGN reports · 2023
    Article
  8. Review
  9. Regenerative failure of intrahepatic biliary cells in Alagille syndrome rescued by elevated Jagged/Notch/Sox9 signaling.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Article
  11. Article
  12. Review
  13. Alagille syndrome and non-syndromic paucity of the intrahepatic bile ducts.Translational gastroenterology and hepatology · 2021
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Alagille syndrome: Genetics and Functional Models.Current pathobiology reports · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Ellen A TsaiDepartment of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania; Genomics and Computational Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
Melissa A GilbertDepartment of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania.
Christopher M GrochowskiDepartment of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania.
Lara A UnderkofflerDepartment of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania.
He MengDepartment of Neurology, University of Michigan, Ann Arbor, Michigan.
Xiaojie ZhangDepartment of Neurology, University of Michigan, Ann Arbor, Michigan.
Michael M WangDepartment of Neurology, University of Michigan, Ann Arbor, Michigan; Department of Physiology, University of Michigan, Ann Arbor, Michigan; VA Ann Arbor Healthcare System, Ann Arbor, Michigan.
Hailu ShitayeMedical Scientist Training Program, University of Michigan, Ann Arbor, Michigan.
Kurt D HankensonDepartment of Physiology, Department of Small Animal Clinical Sciences, Colleges of Natural Science, Osteopathic Medicine, and Veterinary Medicine, Michigan State University, East Lansing, Michigan; Department of Orthopaedic Surgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
David PiccoliDivision of Pediatric Gastroenterology, Hepatology, and Nutrition, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania.
Henry LinDivision of Pediatric Gastroenterology, Hepatology, and Nutrition, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania.
Binita M KamathDivision of Gastroenterology, Hepatology, and Nutrition, Hospital for Sick Children, University of Toronto, Toronto, Canada.
Marcella DevotoDivision of Genetics, Department of Pediatrics, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania; Department of Biostatistics and Epidemiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania; Department of Molecular Medicine, University La Sapienza, Rome, Italy.
Nancy B SpinnerDepartment of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania.
Kathleen M LoomesDivision of Pediatric Gastroenterology, Hepatology, and Nutrition, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania.
Children's Hospital of Philadelphia · USUniversity of Michigan–Ann Arbor · USPhiladelphia University · USUniversity of Pennsylvania · USHospital for Sick Children · CA

Funding

Childhood Liver Disease Research Network Data Coordinating CenterU01DK062456 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MAGEE, JOHN C, MERION, ROBERT M · 2002 to 2019
$36.8M
Training Program in Computational GenomicsT32HG000046 · NHGRI · UNIVERSITY OF PENNSYLVANIA · PI JUNHYONG KIM, Mingyao Li · 1999 to 2026
$9.5M
Mid-Atlantic BANH Consortium SiteU01DK062481 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI Binita Maya Kamath, Kathleen Mary Loomes · 2002 to 2026
$9.2M
Genetic Modifiers of Liver Disease Severity in Alagille SyndromeR01DK081702 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI SPINNER, NANCY BETTINA · 2009 to 2013
$3.5M
Matricellular Proteins and Mesenchymal Stem CellsR01AR049682 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI HANKENSON, KURT DAVID · 2002 to 2006
$1.2M
Notch, LRP, and MMP in Stroke and Vascular DementiaI01BX000375 · VA · VETERANS HEALTH ADMINISTRATION · PI WANG, MICHAEL M · 2009 to 2017
–
BLRD VA I01 BX000375NHGRI NIH HHS T32 HG000046NIAMS NIH HHS R01 AR049682NIDDK NIH HHS R01 DK081702NIDDK NIH HHS U01 DK062456NIDDK NIH HHS U01 DK062481
6 · The paper itself

Abstract

BACKGROUND &

aimsAlagille syndrome is an autosomal-dominant, multisystem disorder caused primarily by mutations in

methodsWe performed a genome-wide association study in a cohort of Caucasian subjects with known pathogenic

resultsWe identified a locus that reached suggestive genome-level significance upstream of the thrombospondin 2 (

conclusionsBased on the genome-wide association study results, thrombospondin 2 localization within bile ducts, and demonstration of interactions of thrombospondin 2 with JAG1 and NOTCH2, we propose that changes in thrombospondin 2 expression may further perturb JAG1-NOTCH2 signaling in patients harboring a

Indexed as

ALGS, Alagille syndromeBSA, bovine serum albumincDNA, complementary DNAChiLDReN, Childhood Liver Disease Research NetworkCholestasisCK19, cytokeratin 19ddPCR, droplet digital polymerase chain reactionGene ModifierGenome-Wide Association StudyGFP, green fluorescent proteinGWAS, genome-wide association studyJAG1NOTCH2PCR, polymerase chain reactionSNP, single-nucleotide polymorphismTHBS2, thrombospondin 2

Identifiers

PMID28090565
PMCPMC5042888
OpenAlexW2397034582

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.