Evidence map›Paper›PMID 28089847›Full record

ArticleNeuropharmacology2017

The binding orientation of epibatidine at α7 nACh receptors.

Andrew J Thompson, Simon Metzger, Martin Lochner, Marc-David Ruepp

Open access · hybridAbstract read
In one paragraph

Article in Neuropharmacology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Efficient Expression inMolecules (Basel, Switzerland) · 2024
    Article
  2. Trapping of Nicotinic Acetylcholine Receptor Ligands Assayed byThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Andrew J ThompsonDepartment of Pharmacology, University of Cambridge, Cambridge, UK. Electronic address: ajt44@cam.ac.uk.
Simon MetzgerDepartment of Chemistry and Biochemistry, University of Bern, Bern, Switzerland.
Martin LochnerDepartment of Chemistry and Biochemistry, University of Bern, Bern, Switzerland; Institute of Biochemistry and Molecular Medicine, University of Bern, Bern, Switzerland.
Marc-David RueppDepartment of Chemistry and Biochemistry, University of Bern, Bern, Switzerland. Electronic address: marc.ruepp@dcb.unibe.ch.
University of Bern · CHUniversity of Cambridge · GB

Funding

British Heart Foundation PG/13/39/30293
6 · The paper itself

Abstract

Epibatidine is an alkaloid toxin that binds with high affinity to nicotinic and muscarinic acetylcholine receptors, and has been extensively used as a research tool. To examine binding interactions at the nicotinic receptor, it has been co-crystallised with the structural homologue acetylcholine binding protein (AChBP; PDB ID 2BYQ), and with an AChBP chimaera (3SQ6) that shares 64% sequence identity with the α7 nACh receptor. However, the binding orientations revealed by AChBP co-crystal structures may not precisely represent their receptor homologues and experimental evidence is needed to verify the ligand poses. Here we identify potential binding site interactions between epibatidine and AChBP residues, and substitute equivalent positions in the α7 nACh receptor. The effects of these are probed by [

Indexed as

alpha7 Nicotinic Acetylcholine ReceptorAnimalsBinding SitesBridged Bicyclo Compounds, HeterocyclicCarrier ProteinsHEK293 CellsHumansMiceMolecular Docking SimulationMutationNicotinic AgonistsPyridinesSequence Homology, Amino AcidTritiumalpha7 Nicotinic Acetylcholine ReceptorBridged Bicyclo Compounds, HeterocyclicCarrier ProteinsepibatidineNicotinic AgonistsPyridinesTritiumAChBPAgonistCys-loopEpibatidineIon channelNicotinicRadioligandReceptorα7 nACh

Identifiers

PMID28089847
PMCPMC5390772
OpenAlexW2578823059

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.