Evidence map›Paper›PMID 28089630›Full record

ArticleFungal genetics and biology : FG & B2017

The Aspergillus nidulans Pbp1 homolog is required for normal sexual development and secondary metabolism.

Alexandra A Soukup, Gregory J Fischer, Jerry Luo, Nancy P Keller

Abstract read
In one paragraph

Article in Fungal genetics and biology : FG & B, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. HJournal of fungi (Basel, Switzerland) · 2021
    Article
  4. Functions of PUF Family RNA-Binding Proteins inJournal of microbiology and biotechnology · 2021
    Article
  5. Journal of fungi (Basel, Switzerland) · 2021
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Alexandra A SoukupDepartment of Genetics, University of Wisconsin-Madison, WI, United States.
Gregory J FischerDepartment of Genetics, University of Wisconsin-Madison, WI, United States.
Jerry LuoDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, WI, United States.
Nancy P KellerDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, WI, United States; Department of Bacteriology, University of Wisconsin-Madison, WI, United States. Electronic address: npkeller@wisc.edu.
University of Wisconsin–Madison · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007133 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PERNA, NICOLE T · 1985 to 2023
$16.5M
RESEARCH TRAINING IN HEMATOLOGYT32HL007899 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Jane Ellen Churpek · 1998 to 2026
$8.2M
Microbial Pathogenesis &Host Responses Training ProgramT32AI055397 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KLEIN, BRUCE STEVEN · 2003 to 2024
$5.5M
Molecular Genetic Mining of the Aspergillus Nidulans Secondary MetabolomeP01GM084077 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI OAKLEY, BERL RAY · 2008 to 2012
$5.4M
NHLBI NIH HHS T32 HL007899NIAID NIH HHS T32 AI055397NIGMS NIH HHS P01 GM084077NIGMS NIH HHS T32 GM007133
6 · The paper itself

Abstract

P bodies and stress granules are RNA-containing structures governing mRNA degradation and translational arrest, respectively. Saccharomyces cerevisiae Pbp1 protein localizes to stress granules and promotes their formation and is involved in proper polyadenylation, suppression of RNA-DNA hybrids, and preventing aberrant rDNA recombination. A genetic screen for Aspergillus nidulans mutants aberrant in secondary metabolism identified the Pbp1 homolog, PbpA. Using Dcp1 (mRNA decapping) as a marker for P-body formation and FabM (Pab1, poly-A binding protein) to track stress granule accumulation, we examine the dynamics of RNA granule formation in A. nidulans cells lacking pub1, edc3, and pbpA. Although PbpA acts as a functional homolog of yeast PBP1, PbpA had little impact on either P-body or stress granule formation in A. nidulans in contrast to Pub1 and Edc3. However, we find that PbpA is critical for sexual development and its loss increases the production of some secondary metabolites including the carcinogen sterigmatocystin.

Indexed as

Aspergillus nidulansCarrier ProteinsCytoplasmic GranulesProtein BindingProtein BiosynthesisRNA StabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSecondary MetabolismSexual DevelopmentSterigmatocystinCarrier ProteinsPBP1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSterigmatocystinRNA granuleSecondary metabolismSexual developmentStress response

Identifiers

PMID28089630
PMCPMC5337145
OpenAlexW2568598909

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.