Evidence map›Paper›PMID 28089325›Full record

ReviewTrends in microbiology2017

Ecology of the Oral Microbiome: Beyond Bacteria.

Jonathon L Baker, Batbileg Bor, Melissa Agnello, Wenyuan Shi, Xuesong He

Abstract readReview
In one paragraph

Review in Trends in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 209 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
209citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

209 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  17. A Review of the Impact of Green Tea (Current pharmaceutical design · 2026
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149 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jonathon L BakerSchool of Dentistry, University of California, Los Angeles, CA 90095, USA.
Batbileg BorSchool of Dentistry, University of California, Los Angeles, CA 90095, USA.
Melissa AgnelloSchool of Dentistry, University of California, Los Angeles, CA 90095, USA.
Wenyuan ShiSchool of Dentistry, University of California, Los Angeles, CA 90095, USA; C3 Jian, Inc. Marina del Rey, CA 90292, USA. Electronic address: wshi@dentistry.ucla.edu.
Xuesong HeSchool of Dentistry, University of California, Los Angeles, CA 90095, USA. Electronic address: xhe@g.ucla.edu.

Funding

Domestication and characterization of TM7-the most elusive oral phylumR01DE023810 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Xuesong He, Jeffrey Scott McLean · 2014 to 2026
$6.6M
Making a quantum leap in plaque research with modern sciencesR01DE020102 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HE, XUESONG, MCLEAN, JEFFREY SCOTT · 2010 to 2020
$3.7M
UCLA Dentist-Scientist and Oral Health-Researcher Training ProgramT90DE022734 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WONG, DAVID T · 2012 to 2017
$2.3M
Studying the Protective Effects of Normal Oral FloraR01DE026186 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HE, XUESONG, MCLEAN, JEFFREY SCOTT · 2016 to 2020
$2.1M
Molecular and pathogenic study of an oral TM7 strain, the first cultivated ultra-small bacteriumR00DE027719 · NIDCR · ADA FORSYTH INSTITUTE, INC. · PI BOR, BATBILEG · 2020 to 2022
$747k
Understanding S. Mutans Pathogenesis in a Social and Ecological SettingF32DE026947 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BAKER, JONATHON · 2017 to 2020
$186k
Phenotypic, transcriptomic and pathogenic study of the first cultivated TM7 strainF32DE025548 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BOR, BATBILEG · 2015 to 2017
$111k
NIDCR NIH HHS F32 DE025548NIDCR NIH HHS F32 DE026947NIDCR NIH HHS R00 DE027719NIDCR NIH HHS R01 DE020102NIDCR NIH HHS R01 DE023810NIDCR NIH HHS R01 DE026186NIDCR NIH HHS T90 DE022734
6 · The paper itself

Abstract

Although great strides have been made in understanding the complex bacterial community inhabiting the human oral cavity, for a variety of (mainly technical) reasons the ecological contributions of oral fungi, viruses, phages, and the candidate phyla radiation (CPR) group of ultrasmall bacteria have remained understudied. Several recent reports have illustrated the diversity and importance of these organisms in the oral cavity, while TM7x and Candida albicans have served as crucial paradigms for CPR species and oral fungi, respectively. A comprehensive understanding of the oral microbiota and its influence on host health and disease will require a holistic view that emphasizes interactions among different residents within the oral community, as well as their interaction with the host.

Indexed as

MicrobiotaBacteriaBacteriophagesBiodiversityFungiHumansMetagenomeMouthVirusesCandidate phyla radiationFungiMeta-omicsOral microbiomePhage

Identifiers

PMID28089325
PMCPMC5687246

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.