Evidence map›Paper›PMID 28088440›Full record

ReviewBiochimica et biophysica acta. Gene regulatory mechanisms2017

Intersections of post-transcriptional gene regulatory mechanisms with intermediary metabolism.

Waqar Arif, Gandhar Datar, Auinash Kalsotra

Open access · hybridAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta. Gene regulatory mechanisms, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Alternative Splicing in Hepatocellular Carcinoma.Cellular and molecular gastroenterology and hepatology · 2020
    Review
  12. Article
  13. A brave new world of RNA-binding proteins.Nature reviews. Molecular cell biology · 2018
    Review
  14. Review
  15. eLife · 2017
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Waqar ArifDepartment of Biochemistry, University of Illinois, Urbana-Champaign, IL, USA; College of Medicine, University of Illinois, Urbana-Champaign, IL, USA.
Gandhar DatarDepartment of Biochemistry, University of Illinois, Urbana-Champaign, IL, USA.
Auinash KalsotraDepartment of Biochemistry, University of Illinois, Urbana-Champaign, IL, USA; College of Medicine, University of Illinois, Urbana-Champaign, IL, USA; Carl R. Woese Institute of Genomic Biology, University of Illinois, Urbana-Champaign, IL, USA. Electronic address: kalsotra@illinois.edu.
University of Illinois Urbana-Champaign · US

Funding

Post-transcriptional mechanisms of gene regulation in cardiac cell growth and developmentR01HL126845 · NHLBI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KALSOTRA, AUINASH · 2015 to 2023
$3.5M
The role of SRSF1 in liver function and NASHF30DK108567 · NIDDK · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI ARIF, WAQAR · 2016 to 2020
$248k
NHLBI NIH HHS R01 HL126845NIDDK NIH HHS F30 DK108567
6 · The paper itself

Abstract

Intermediary metabolism studies have typically concentrated on four major regulatory mechanisms-substrate availability, allosteric enzyme regulation, post-translational enzyme modification, and regulated enzyme synthesis. Although transcriptional control has been a big focus, it is becoming increasingly evident that many post-transcriptional events are deeply embedded within the core regulatory circuits of enzyme synthesis/breakdown that maintain metabolic homeostasis. The prominent post-transcriptional mechanisms affecting intermediary metabolism include alternative pre-mRNA processing, mRNA stability and translation control, and the more recently discovered regulation by noncoding RNAs. In this review, we discuss the latest advances in our understanding of these diverse mechanisms at the cell-, tissue- and organismal-level. We also highlight the dynamics, complexity and non-linear nature of their regulatory roles in metabolic decision making, and deliberate some of the outstanding questions and challenges in this rapidly expanding field.

Indexed as

AnimalsGene Expression Regulation, EnzymologicGene Regulatory NetworksHumansProtein Processing, Post-TranslationalRNA PrecursorsRNA Processing, Post-TranscriptionalRNA PrecursorsAlternative splicingLncRNAMetabolic syndromeMicroRNAPost-transcriptional gene regulation

Identifiers

PMID28088440
PMCPMC5325806
OpenAlexW2577669964

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.