Evidence map›Paper›PMID 28087803›Full record

ArticleFEMS microbiology ecology2017

Epiphytic Planctomycetes communities associated with three main groups of macroalgae.

Joana Bondoso, Filipa Godoy-Vitorino, Vanessa Balagué, Josep M Gasol, Jens Harder, Olga Maria Lage

Open access · bronzeAbstract read
In one paragraph

Article in FEMS microbiology ecology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 101 citations in OpenAlex.

  1. Pooled it
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  13. Phylogenetic diversity and community structure ofFrontiers in microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

Joana BondosoDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre s/n° 4169-007 Porto, Portugal.
Filipa Godoy-VitorinoDepartment of Natural Sciences, Microbial Ecology and Genomics Lab, College of Sciences and Technology, Inter American University of Puerto Rico-Metropolitan Campus, San Juan, PR 00919, USA.
Vanessa BalaguéInstitut de Ciències del Mar-CSIC, Passeig Marítim de la Barceloneta 37-49, 08003 Barcelona, Catalonia, Spain.
Josep M GasolInstitut de Ciències del Mar-CSIC, Passeig Marítim de la Barceloneta 37-49, 08003 Barcelona, Catalonia, Spain.
Jens HarderDepartment of Microbiology, Max Planck Institute for Marine Microbiology, Celsiusstr. 1, 28359 Bremen, Germany.
Olga Maria LageDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre s/n° 4169-007 Porto, Portugal.
Institut Català de Ciències del Clima · ESUniversidade do Porto · PTInterAmerican University of Puerto Rico · PRMax Planck Institute for Marine Microbiology · DE

Funding

SCIENCE AND TECHNOLOGY COMPETENCY & EDUCATION CORE (STCE)P20GM103475 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI Humberto Guillermo Ortiz-Zuazaga · 2012 to 2026
$52.9M
NIGMS NIH HHS P20 GM103475
6 · The paper itself

Abstract

Planctomycetes, a unique group of widespread and understudied bacteria, are known to be associated with macroalgae. The temporal dynamics and the host-specific association of planctomycetal communities on Fucus spiralis, Ulva sp. and Chondrus crispus from two locations in the North Coast of Portugal were assessed both by denaturing gradient gel electrophoresis with group-specific primers and 16S rDNA amplicon libraries. The epiphytic planctomycetal communities showed a significant association with the host macroalgal species independently of the geographical location and the season. This pattern was confirmed by clone libraries of winter and summer samples: we obtained 720 16S rRNA gene sequences that represented 44 operational taxonomic units (OTUs) within the phylum Planctomycetes. Most of the OTUs belonged to Blastopirellula, followed by Rhodopirellula, Planctomyces, the Pir4 lineage and the uncultured class OM190 (this last one nearly 30% of the OTUs). Ulva sp. and C. crispus had more diverse planctomycetal communities than F. spiralis. Analysis of beta diversity showed that the planctomycetal microbiome was host specific. We hypothesize that the specific association of Planctomycetes and their macroalgal hosts is likely determined by nutritional molecules provided by the algae and the set of sulfatases inherent to each Planctomycetes species.

Indexed as

BacteriaDenaturing Gradient Gel ElectrophoresisDNA PrimersDNA, RibosomalHost SpecificityPhylogenyPlanctomycetalesPortugalRNA, Ribosomal, 16SSeaweedDNA PrimersDNA, RibosomalRNA, Ribosomal, 16S16S rRNA gene clone librariesDGGEmacroalgaePlanctomycetes

Identifiers

PMID28087803
PMCPMC5975077
OpenAlexW2579446084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.