ArticleBMC evolutionary biology2017
Quantifying predictors for the spatial diffusion of avian influenza virus in China.
Article in BMC evolutionary biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.
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Who cites it
24 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.
- Pooled it
- Poultry farm density and proximity drive highly pathogenic avian influenza spread.Communications biology · 2025Article
- Quantifying Time-Dependent Predictors for the International Spatial Spread of Highly Pathogenic Avian Influenza H5NX: Focus on Trade and Surveillance Efforts.Transboundary and emerging diseases · 2025Article
- Phylodynamic analysis revealed that human mobility and vaccination were correlated to the local spread of SARS-CoV-2 in Republic of Korea.Emerging microbes & infections · 2023Article
- Bayesian phylodynamics reveals the transmission dynamics of avian influenza A(H7N9) virus at the human-live bird market interface in China.Proceedings of the National Academy of Sciences of the United States of America · 2023Article
- H9N2 avian influenza virus dispersal along Bangladeshi poultry trading networks.Virus evolution · 2023Article
- Genomic epidemiology of the SARS-CoV-2 epidemic in Brazil.Nature microbiology · 2022Article
- The COVID-19 pandemic: Virus transmission and risk assessment.Current opinion in environmental science & health · 2022Review
- Host diversity and behavior determine patterns of interspecies transmission and geographic diffusion of avian influenza A subtypes among North American wild reservoir species.PLoS pathogens · 2022Article
- Genomic epidemiology reveals the impact of national and international restrictions measures on the SARS-CoV-2 epidemic in Brazil.medRxiv : the preprint server for health sciences · 2022Article
- H5Nx Viruses Emerged during the Suppression of H5N1 Virus Populations in Poultry.Microbiology spectrum · 2021Article
- The novel SARS-CoV-2 pandemic: Possible environmental transmission, detection, persistence and fate during wastewater and water treatment.The Science of the total environment · 2021Review
- Spatiotemporal reconstruction and transmission dynamics during the 2016-17 H5N8 highly pathogenic avian influenza epidemic in Italy.Transboundary and emerging diseases · 2021Article
- The Molecular Epidemiology and Transmission Dynamics of HIV Type 1 in a General Population Cohort in Uganda.Viruses · 2020Article
- Fine-scale tracking of wild waterfowl and their impact on highly pathogenic avian influenza outbreaks in the Republic of Korea, 2014-2015.Scientific reports · 2020Article
- Detection and Genetic Characterization of Puumala Orthohantavirus S-Segment in Areas of France Non-Endemic for Nephropathia Epidemica.Pathogens (Basel, Switzerland) · 2020Article
- The impact of COVID-19 on transport volume and freight capacity dynamics: An empirical analysis in German food retail logistics.Transportation research interdisciplinary perspectives · 2020Article
- Assessing the role of live poultry trade in community-structured transmission of avian influenza in China.Proceedings of the National Academy of Sciences of the United States of America · 2020Article
- Emergence of human avian influenza A(H7N9) virus infections in Wenshan City in Southwest China, 2017.BMC infectious diseases · 2020Article
- Agricultural and geographic factors shaped the North American 2015 highly pathogenic avian influenza H5N2 outbreak.PLoS pathogens · 2020Article
Corrections and comments
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Authors and funding
3 authors at 1 institution in 1 country.
Funding
Abstract
backgroundAvian influenza virus (AIV) causes both severe outbreaks and endemic disease among poultry and has caused sporadic human infections in Asia, furthermore the routes of transmission in avian species between geographic regions can be numerous and complex. Using nucleotide sequences from the internal protein coding segments of AIV, we performed a Bayesian phylogeographic study to uncover regional routes of transmission and factors predictive of the rate of viral diffusion within China.
resultsWe found that the Central area and Pan-Pearl River Delta were the two main sources of AIV diffusion, while the East Coast areas especially the Yangtze River delta, were the major targets of viral invasion. Next we investigated the extent to which economic, agricultural, environmental and climatic regional data was predictive of viral diffusion by fitting phylogeographic discrete trait models using generalised linear models.
conclusionsOur results highlighted that the economic-agricultural predictors, especially the poultry population density and the number of farm product markets, are the key determinants of spatial diffusion of AIV in China; high human density and freight transportation are also important predictors of high rates of viral transmission; Climate features (e.g. temperature) were correlated to the viral invasion in the destination to some degree; while little or no impacts were found from natural environment factors (such as surface water coverage). This study uncovers the risk factors and enhances our understanding of the spatial dynamics of AIV in bird populations.
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