Evidence map›Paper›PMID 28083537›Full record

ArticleFrontiers in molecular biosciences2016

Comparative Normal Mode Analysis of the Dynamics of DENV and ZIKV Capsids.

Yin-Chen Hsieh, Frédéric Poitevin, Marc Delarue, Patrice Koehl

Open access · goldAbstract read
In one paragraph

Article in Frontiers in molecular biosciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. MODE-TASK: large-scale protein motion tools.Bioinformatics (Oxford, England) · 2018
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Yin-Chen HsiehDepartment of Computer Science and Genome Center, University of California, Davis Davis, CA, USA.
Frédéric PoitevinDepartment of Structural Biology, Stanford UniversityStanford, CA, USA; SLAC National Accelerator Laboratory, Stanford PULSE InstituteMenlo Park, CA, USA.
Marc DelarueUnit of Structural Dynamics of Macromolecules, UMR 3528 du Centre National de la Recherche Scientifique, Institut Pasteur Paris, France.
Patrice KoehlDepartment of Computer Science and Genome Center, University of California, Davis Davis, CA, USA.
University of California, Davis · USInstitut Pasteur · FRSLAC National Accelerator Laboratory · US

Funding

Emergent Properties of Complex Systems: From Atoms to Macromolecules; from Humans to SocietiesR35GM122543 · NIGMS · STANFORD UNIVERSITY · PI MICHAEL LEVITT · 2017 to 2026
$5.1M
NIGMS NIH HHS R35 GM122543
6 · The paper itself

Abstract

Key steps in the life cycle of a virus, such as the fusion event as the virus infects a host cell and its maturation process, relate to an intricate interplay between the structure and the dynamics of its constituent proteins, especially those that define its capsid, much akin to an envelope that protects its genomic material. We present a comprehensive, comparative analysis of such interplay for the capsids of two viruses from the

Indexed as

Dengueelastic network modelsnormal modesproteinsvirusesZika

Identifiers

PMID28083537
PMCPMC5187361
OpenAlexW2561248324

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.