Evidence map›Paper›PMID 28082492›Full record

ArticleGenome announcements2017

Metagenomic Analysis of Cucumber RNA from East Timor Reveals an Aphid lethal paralysis virus Genome.

Solomon Maina, Owain R Edwards, Luis de Almeida, Abel Ximenes, Roger A C Jones

Abstract read
In one paragraph

Article in Genome announcements, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Aphid Viruses: A Brief View of a Long History.Frontiers in insect science · 2022
    Review
  6. Genome Sequence and Phylogeny of aMicrobiology resource announcements · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Transcriptome Sequencing Reveals a Complete Genome Sequence ofMicrobiology resource announcements · 2019
    Article
  12. Article
  13. Article
  14. Two Complete Genome Sequences ofGenome announcements · 2017
    Article
  15. Article
  16. First CompleteGenome announcements · 2017
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Solomon MainaSchool of Agriculture and Environment, Faculty of Science, University of Western Australia, Crawley, Western Australia, Australia.
Owain R EdwardsCooperative Research Centre for Plant Biosecurity, Canberra, Australian Capital Territory, Australia.
Luis de AlmeidaSeeds of Life Project, Ministry of Agriculture and Fisheries, Dili, East Timor.
Abel XimenesDNQB-Plant Quarantine International Airport Nicolau Lobato Comoro, Dili, East Timor.
Roger A C JonesInstitute of Agriculture, Faculty of Science, University of Western Australia, Crawley, Western Australia, Australia roger.jones@uwa.edu.au.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present here the first complete genomic Aphid lethal paralysis virus (ALPV) sequence isolated from cucumber plant RNA from East Timor. We compare it with two complete ALPV genome sequences from China, and one each from Israel, South Africa, and the United States. It most closely resembled the Chinese isolate LGH genome.

Identifiers

PMID28082492
PMCPMC5256216

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.