Evidence map›Paper›PMID 28081607›Full record

ArticleACS infectious diseases2017

Structure-Activity Relationships of Spectinamide Antituberculosis Agents: A Dissection of Ribosomal Inhibition and Native Efflux Avoidance Contributions.

Jiuyu Liu, David F Bruhn, Robin B Lee, Zhong Zheng, Tanja Janusic, Dimitri Scherbakov, Michael S Scherman, Helena I Boshoff, Sourav Das, Rakesh and 11 more

Abstract read
In one paragraph

Article in ACS infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 57 citations in OpenAlex.

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  8. Development of 2nd generation aminomethyl spectinomycins that overcome native efflux inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. TargetingRSC medicinal chemistry · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 3 countries.

Jiuyu LiuDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
David F BruhnDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
Robin B LeeDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
Zhong ZhengDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
Tanja JanusicInstitut für Medizinische Mikrobiologie, Nationales Zentrum für Mykobakterien, Universität Zürich , Rämistrasse 71, Gloriastrasse 30/32, CH-8006 Zürich, Switzerland.
Dimitri ScherbakovInstitut für Medizinische Mikrobiologie, Nationales Zentrum für Mykobakterien, Universität Zürich , Rämistrasse 71, Gloriastrasse 30/32, CH-8006 Zürich, Switzerland.
Michael S SchermanMycobacterial Research Laboratories, Department of Microbiology, Colorado State University , 1682 Campus Delivery, Fort Collins, Colorado 80523, United States.
Helena I BoshoffTuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute for Allergy and Infectious Disease, National Institutes of Health , 33 North Drive, Bethesda, Maryland 20814, United States.
Sourav DasDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
RakeshDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
Samanthi L WaidyarachchiDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
Tiffany A BrewerDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
Begoña GraciaDepartamento de Microbiologı́a, Medicina Preventiva y Salud Pública, and BIFI, Universidad de Zaragoza and CIBER Enfermedades Respiratorias (CIBERES) , 50009 Zaragoza, Spain.
Lei YangDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
John BollingerDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
Gregory T RobertsonMycobacterial Research Laboratories, Department of Microbiology, Colorado State University , 1682 Campus Delivery, Fort Collins, Colorado 80523, United States.
Bernd MeibohmDepartment of Pharmaceutical Sciences, University of Tennessee Health Science Center , 881 Madison Avenue, Memphis, Tennessee 38163, United States.
Anne J LenaertsMycobacterial Research Laboratories, Department of Microbiology, Colorado State University , 1682 Campus Delivery, Fort Collins, Colorado 80523, United States.
Jose AinsaDepartamento de Microbiologı́a, Medicina Preventiva y Salud Pública, and BIFI, Universidad de Zaragoza and CIBER Enfermedades Respiratorias (CIBERES) , 50009 Zaragoza, Spain.
Erik C BöttgerInstitut für Medizinische Mikrobiologie, Nationales Zentrum für Mykobakterien, Universität Zürich , Rämistrasse 71, Gloriastrasse 30/32, CH-8006 Zürich, Switzerland.
Richard E LeeDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital , 262 Danny Thomas Place, MS#1000, Memphis, Tennessee 38105, United States.
St. Jude Children's Research Hospital · USColorado State University · USUniversity of Zurich · CHCentro de Investigación Biomédica en Red de Enfermedades Respiratorias · ESUniversity of Tennessee Health Science Center · USNational Institute of Allergy and Infectious Diseases · US

Funding

Development of Novel Proteins Synthesis Inhibitors for MDR TuberculosisR01AI090810 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI LEE, RICHARD E. · 2010 to 2022
$8.9M
Mass Spectrometer for Small Molecule Drug DevelopmentS10OD016226 · OD · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI MEIBOHM, BERND · 2014 to 2014
$316k
NIAID NIH HHS R01 AI090810NIH HHS S10 OD016226
6 · The paper itself

Abstract

Spectinamides are a novel class of antitubercular agents with the potential to treat drug-resistant tuberculosis infections. Their antitubercular activity is derived from both ribosomal affinity and their ability to overcome intrinsic efflux mediated by the Mycobacterium tuberculosis Rv1258c efflux pump. This study explores the structure-activity relationships through analysis of 50 targeted spectinamides. Compounds are evaluated for ribosomal translational inhibition, MIC activity in Rv1258c efflux pump deficient and wild type tuberculosis strains, and efficacy in an acute model of tuberculosis infection. The results of this study show a narrow structure-activity relationship, consistent with a tight ribosome-binding pocket and strict structural requirements to overcome native efflux. Rationalization of ribosomal inhibition data using molecular dynamics simulations showed stable complex formation for halogenated spectinamides consistent with the long post antibiotic effects observed. The lead spectinamides identified in this study demonstrated potent MIC activity against MDR and XDR tuberculosis and had desirable antitubercular class specific features including low protein binding, low microsomal metabolism, no cytotoxicity, and significant reductions in bacterial burdens in the lungs of mice infected with M. tuberculosis. The structure-activity relationships detailed here emphasize the need to examine efflux-mediated resistance in the design of antituberculosis drugs and demonstrate that it is possible to overcome intrinsic efflux with synthetic modification. The ability to understand the structure requirements for this class has produced a variety of new substituted spectinamides, which may provide useful alternative candidates and promote the further development of this class.

Indexed as

Antitubercular AgentsDrug DiscoveryModels, MolecularMolecular StructureRibosomesSpectinomycinStructure-Activity RelationshipAntitubercular AgentsSpectinomycinantituberculosisefficacyefflux pumpspectinamidespectinomycinstructure−activity relationship

Identifiers

PMID28081607
PMCPMC5493200
OpenAlexW2528953941

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.