Evidence map›Paper›PMID 28078793›Full record

ReviewWiley interdisciplinary reviews. Systems biology and medicine2017

Insights into nuclear dynamics using live-cell imaging approaches.

Rachel B Bigley, Alexander Y Payumo, Jeffrey M Alexander, Guo N Huang

Abstract readReview
In one paragraph

Review in Wiley interdisciplinary reviews. Systems biology and medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Rachel B BigleyCardiovascular Research Institute and Department of Physiology, School of Medicine, University of California, San Francisco, CA, USA.
Alexander Y PayumoCardiovascular Research Institute and Department of Physiology, School of Medicine, University of California, San Francisco, CA, USA.
Jeffrey M AlexanderCardiovascular Research Institute and Department of Physiology, School of Medicine, University of California, San Francisco, CA, USA.
Guo N HuangCardiovascular Research Institute and Department of Physiology, School of Medicine, University of California, San Francisco, CA, USA.

Funding

UCSF IRACDA Scholars ProgramK12GM081266 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Raymond M. Esquerra, HOLLY A. INGRAHAM · 2007 to 2026
$19.4M
Retinoic Acid Signaling in Heart Development and RegenerationR00HL114738 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUANG, GUO · 2014 to 2016
$745k
Retinoic Acid Signaling in Heart Development and RegenerationK99HL114738 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI HUANG, GUO · 2012 to 2013
$249k
NHLBI NIH HHS K99 HL114738NHLBI NIH HHS R00 HL114738NIGMS NIH HHS K12 GM081266
6 · The paper itself

Abstract

The nucleus contains the genetic blueprint of the cell and myriad interactions within this subcellular structure are required for gene regulation. In the current scientific era, characterization of these gene regulatory networks through biochemical techniques coupled with systems-wide 'omic' approaches has become commonplace. However, these strategies are limited because they represent a mere snapshot of the cellular state. To obtain a holistic understanding of nuclear dynamics, relevant molecules must be studied in their native contexts in living systems. Live-cell imaging approaches are capable of providing quantitative assessment of the dynamics of gene regulatory interactions within the nucleus. We survey recent insights into what live-cell imaging approaches have provided the field of nuclear dynamics. In this review, we focus on interactions of DNA with other DNA loci, proteins, RNA, and the nuclear envelope. WIREs Syst Biol Med 2017, 9:e1372. doi: 10.1002/wsbm.1372 For further resources related to this article, please visit the WIREs website.

Indexed as

Models, BiologicalCell NucleusDNANuclear EnvelopeNuclear ProteinsRNADNANuclear ProteinsRNA

Identifiers

PMID28078793
PMCPMC5315593

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.