Evidence map›Paper›PMID 28077874›Full record

ArticleNature2017

Asgard archaea illuminate the origin of eukaryotic cellular complexity.

Katarzyna Zaremba-Niedzwiedzka, Eva F Caceres, Jimmy H Saw, Disa Bäckström, Lina Juzokaite, Emmelien Vancaester, Kiley W Seitz, Karthik Anantharaman, Piotr Starnawski, Kasper U Kjeldsen and 7 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 567 papers.

0numbers the graph read from it
0cells of the map it votes in
567citing papers in PubMed
55.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

567 citing papers in PubMed, 1,204 citations in OpenAlex.

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  19. Environmental phylogenetics supports a steady diversification of crown eukaryotes starting from the mid-Proterozoic.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  20. Article

507 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 5 countries.

Katarzyna Zaremba-NiedzwiedzkaDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, SE-75123 Uppsala, Sweden.
Eva F CaceresDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, SE-75123 Uppsala, Sweden.
Jimmy H SawDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, SE-75123 Uppsala, Sweden.
Disa BäckströmDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, SE-75123 Uppsala, Sweden.
Lina JuzokaiteDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, SE-75123 Uppsala, Sweden.
Emmelien VancaesterDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, SE-75123 Uppsala, Sweden.
Kiley W SeitzDepartment of Marine Science, University of Texas-Austin, Marine Science Institute, Port Aransas, Texas 78373, USA.
Karthik AnantharamanDepartment of Earth and Planetary Sciences, and Department of Environmental Science, Policy, and Management, University of California, Berkeley, California, USA.
Piotr StarnawskiSection for Microbiology and Center for Geomicrobiology, Department of Bioscience, Aarhus University, DK-8000 Aarhus, Denmark.
Kasper U KjeldsenSection for Microbiology and Center for Geomicrobiology, Department of Bioscience, Aarhus University, DK-8000 Aarhus, Denmark.
Matthew B StottGNS Science, Extremophile Research Group, Private Bag 2000, Taupō 3352, New Zealand.
Takuro NunouraResearch and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology, Yokosuka 237-0061, Japan.
Jillian F BanfieldDepartment of Earth and Planetary Sciences, and Department of Environmental Science, Policy, and Management, University of California, Berkeley, California, USA.
Andreas SchrammSection for Microbiology and Center for Geomicrobiology, Department of Bioscience, Aarhus University, DK-8000 Aarhus, Denmark.
Brett J BakerDepartment of Marine Science, University of Texas-Austin, Marine Science Institute, Port Aransas, Texas 78373, USA.
Anja SpangDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, SE-75123 Uppsala, Sweden.
Thijs J G EttemaDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, SE-75123 Uppsala, Sweden.
Science for Life Laboratory · SEUppsala University · SEAarhus University · DKUniversity of California, Berkeley · USGNS Science · NZJapan Agency for Marine-Earth Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The origin and cellular complexity of eukaryotes represent a major enigma in biology. Current data support scenarios in which an archaeal host cell and an alphaproteobacterial (mitochondrial) endosymbiont merged together, resulting in the first eukaryotic cell. The host cell is related to Lokiarchaeota, an archaeal phylum with many eukaryotic features. The emergence of the structural complexity that characterizes eukaryotic cells remains unclear. Here we describe the 'Asgard' superphylum, a group of uncultivated archaea that, as well as Lokiarchaeota, includes Thor-, Odin- and Heimdallarchaeota. Asgard archaea affiliate with eukaryotes in phylogenomic analyses, and their genomes are enriched for proteins formerly considered specific to eukaryotes. Notably, thorarchaeal genomes encode several homologues of eukaryotic membrane-trafficking machinery components, including Sec23/24 and TRAPP domains. Furthermore, we identify thorarchaeal proteins with similar features to eukaryotic coat proteins involved in vesicle biogenesis. Our results expand the known repertoire of 'eukaryote-specific' proteins in Archaea, indicating that the archaeal host cell already contained many key components that govern eukaryotic cellular complexity.

Indexed as

Evolution, MolecularModels, BiologicalPhylogenyArchaeaArchaeal ProteinsBiological TransportCOP-Coated VesiclesEukaryotaEukaryotic CellsGenome, ArchaealMetagenomicsArchaeal Proteins

Identifiers

PMID28077874
OpenAlexW2578958622

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.