Evidence map›Paper›PMID 28076815›Full record

ArticleBiophysical journal2017

Fluorescent Labeling Preserving OCP Photoactivity Reveals Its Reorganization during the Photocycle.

Eugene G Maksimov, Nikolai N Sluchanko, Kirill S Mironov, Evgeny A Shirshin, Konstantin E Klementiev, Georgy V Tsoraev, Marcus Moldenhauer, Thomas Friedrich, Dmitry A Los, Suleyman I Allakhverdiev and 2 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Fluorescence recovery protein: a powerful yet underexplored regulator of photoprotection in cyanobacteria†.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2020
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Eugene G MaksimovDepartment of Biophysics, Lomonosov Moscow State University, Moscow, Russia. Electronic address: emaksimoff@yandex.ru.
Nikolai N SluchankoLaboratory of Structural Biochemistry of Proteins, A. N. Bach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.
Kirill S MironovLaboratory of Cell Regulation, K. A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Moscow, Russia.
Evgeny A ShirshinInstitute of Chemistry, Technical University of Berlin, Berlin, Germany.
Konstantin E KlementievDepartment of Biophysics, Lomonosov Moscow State University, Moscow, Russia.
Georgy V TsoraevDepartment of Biophysics, Lomonosov Moscow State University, Moscow, Russia.
Marcus MoldenhauerDepartment of Intracellular Regulation, Institute of Plant Physiology, Moscow, Russia.
Thomas FriedrichDepartment of Intracellular Regulation, Institute of Plant Physiology, Moscow, Russia.
Dmitry A LosDepartment of Intracellular Regulation, Institute of Plant Physiology, Moscow, Russia.
Suleyman I AllakhverdievLaboratory of Cell Regulation, K. A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Moscow, Russia; Institute of Basic Biological Problems, Russian Academy of Sciences, Moscow, Russia. Electronic address: suleyman.allakhverdiev@gmail.com.
Vladimir Z PaschenkoDepartment of Biophysics, Lomonosov Moscow State University, Moscow, Russia.
Andrew B RubinDepartment of Biophysics, Lomonosov Moscow State University, Moscow, Russia.
Lomonosov Moscow State University · RUTechnische Universität Berlin · DETimiryazev Institute of Plant Physiology · RUA N Bach Institute of Biochemistry · RUInstitute of Basic Biological Problems · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Orange carotenoid protein (OCP), responsible for the photoprotection of the cyanobacterial photosynthetic apparatus under excessive light conditions, undergoes significant rearrangements upon photoconversion and transits from the stable orange to the signaling red state. This is thought to involve a 12-Å translocation of the carotenoid cofactor and separation of the N- and C-terminal protein domains. Despite clear recent progress, the detailed mechanism of the OCP photoconversion and associated photoprotection remains elusive. Here, we labeled the OCP of Synechocystis with tetramethylrhodamine-maleimide (TMR) and obtained a photoactive OCP-TMR complex, the fluorescence of which was highly sensitive to the protein state, showing unprecedented contrast between the orange and red states and reflecting changes in protein conformation and the distances from TMR to the carotenoid throughout the photocycle. The OCP-TMR complex was sensitive to the light intensity, temperature, and viscosity of the solvent. Based on the observed Förster resonance energy transfer, we determined that upon photoconversion, the distance between TMR (donor) bound to a cysteine in the C-terminal domain and the carotenoid (acceptor) increased by 18 Å, with simultaneous translocation of the carotenoid into the N-terminal domain. Time-resolved fluorescence anisotropy revealed a significant decrease of the OCP rotation rate in the red state, indicating that the light-triggered conversion of the protein is accompanied by an increase of its hydrodynamic radius. Thus, our results support the idea of significant structural rearrangements of OCP, providing, to our knowledge, new insights into the structural rearrangements of OCP throughout the photocycle and a completely novel approach to the study of its photocycle and non-photochemical quenching. We suggest that this approach can be generally applied to other photoactive proteins.

Indexed as

PhotoperiodBacterial ProteinsFluorescent DyesModels, MolecularProtein ConformationRhodaminesSolventsSpectrometry, FluorescenceTemperatureViscosityBacterial ProteinsFluorescent Dyesorange carotenoid protein, SynechocystisRhodaminesSolventstetramethylrhodamine

Identifiers

PMID28076815
PMCPMC5232356
OpenAlexW2570469997

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.