Evidence map›Paper›PMID 28074944›Full record

ArticleChemical communications (Cambridge, England)2017

Synthesis and biophysical analysis of modified thymine-containing DNA oligonucleotides.

F Kawasaki, P Murat, Z Li, T Santner, S Balasubramanian

Open access · hybridAbstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Comparative Nucleosomal Reactivity of 5-Formyl-Uridine and 5-Formyl-Cytidine.Chemistry (Weinheim an der Bergstrasse, Germany) · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Sequencing 5-Hydroxymethyluracil at Single-Base Resolution.Angewandte Chemie (International ed. in English) · 2018
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

F KawasakiDepartment of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK. sb10031@cam.ac.uk.
P MuratDepartment of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK. sb10031@cam.ac.uk.
Z LiDepartment of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK. sb10031@cam.ac.uk.
T SantnerDepartment of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK. sb10031@cam.ac.uk.
S BalasubramanianDepartment of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK. sb10031@cam.ac.uk and Cancer Research UK Cambridge Institute, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK and School of Clinical Medicine, University of Cambridge, Cambridge CB2 0SP, UK.ORCID http://orcid.org/0000-0002-0281-5815
University of Cambridge · GB

Funding

Cancer Research UK 18618Wellcome Trust
6 · The paper itself

Abstract

We report the synthesis of a 5-formyl-2'-deoxyuridine (5fU) phosphoramidite and the preparation of oligonucleotides comprising all known, naturally observed eukaryotic thymidine modifications. Biophysical characterization of the synthetic oligonucleotides indicates that 5fU, but not the other T-derivatives, can alter DNA structures.

Indexed as

DeoxyuridineDNAOligonucleotidesOrganophosphorus CompoundsThymine5-formyl-2'-deoxyuridineDeoxyuridineDNAOligonucleotidesOrganophosphorus CompoundsphosphoramiditeThymine

Identifiers

PMID28074944
PMCPMC5759927
OpenAlexW2568980355

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.