Evidence map›Paper›PMID 28074929›Full record

ArticleScientific reports2017

Evolution of protein N-glycosylation process in Golgi apparatus which shapes diversity of protein N-glycan structures in plants, animals and fungi.

Peng Wang, Hong Wang, Jiangtao Gai, Xiaoli Tian, Xiaoxiao Zhang, Yongzhi Lv, Yi Jian

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 42 citations in OpenAlex.

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  18. Article
  19. Frontiers in plant science · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Peng WangTropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences &Ministry of Agriculture Key Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Danzhou, Hainan 571737, China.
Hong WangMolecular Immunology and Antibody Engineering Center, College of Life Sciences, Jinan University, Guangzhou, Guangdong 510632, China.
Jiangtao GaiTropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences &Ministry of Agriculture Key Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Danzhou, Hainan 571737, China.
Xiaoli TianDepartment of Anesthesia and Perioperative Care, University of California, San Francisco, San Francisco, CA 94143, USA.
Xiaoxiao ZhangState Key Laboratory of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi 830011, China.
Yongzhi LvTropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences &Ministry of Agriculture Key Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Danzhou, Hainan 571737, China.
Yi JianTropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences &Ministry of Agriculture Key Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Danzhou, Hainan 571737, China.
Chinese Academy of Tropical Agricultural Sciences · CNTropical Crops Genetic Resources Institute · CNJinan University · CNUniversity of California, San Francisco · USXinjiang Institute of Ecology and Geography · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein N-glycosylation (PNG) is crucial for protein folding and enzymatic activities, and has remarkable diversity among eukaryotic species. Little is known of how unique PNG mechanisms arose and evolved in eukaryotes. Here we demonstrate a picture of onset and evolution of PNG components in Golgi apparatus that shaped diversity of eukaryotic protein N-glycan structures, with an emphasis on roles that domain emergence and combination played on PNG evolution. 23 domains were identified from 24 known PNG genes, most of which could be classified into a single clan, indicating a single evolutionary source for the majority of the genes. From 153 species, 4491 sequences containing the domains were retrieved, based on which we analyzed distribution of domains among eukaryotic species. Two domains in GnTV are restricted to specific eukaryotic domains, while 10 domains distribute not only in species where certain unique PNG reactions occur and thus genes harboring these domains are supoosed to be present, but in other ehkaryotic lineages. Notably, two domains harbored by β-1,3 galactosyltransferase, an essential enzyme in forming plant-specific Le

Indexed as

Evolution, MolecularAmino Acid SequenceAnimalsFungiGlycosylationGolgi ApparatusMannosePlantsPolysaccharidesProtein DomainsProteinsMannosePolysaccharidesProteins

Identifiers

PMID28074929
PMCPMC5225481
OpenAlexW2579376839

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.