Evidence map›Paper›PMID 28074041›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Transcription factor Xpp1 is a switch between primary and secondary fungal metabolism.

Christian Derntl, Bernhard Kluger, Christoph Bueschl, Rainer Schuhmacher, Robert L Mach, Astrid R Mach-Aigner

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
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  10. Synthetic and systems biotechnology · 2022
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  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Understanding the Role ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Christian DerntlResearch Area Biochemical Technology, Institute of Chemical Engineering, TU Wien, A-1060 Vienna, Austria.
Bernhard KlugerCenter for Analytical Chemistry, Department of Agrobiotechnology, University of Natural Resources and Life Sciences, A-3430 Tulln, Austria.
Christoph BueschlCenter for Analytical Chemistry, Department of Agrobiotechnology, University of Natural Resources and Life Sciences, A-3430 Tulln, Austria.
Rainer SchuhmacherCenter for Analytical Chemistry, Department of Agrobiotechnology, University of Natural Resources and Life Sciences, A-3430 Tulln, Austria.
Robert L MachResearch Area Biochemical Technology, Institute of Chemical Engineering, TU Wien, A-1060 Vienna, Austria.
Astrid R Mach-AignerResearch Area Biochemical Technology, Institute of Chemical Engineering, TU Wien, A-1060 Vienna, Austria; astrid.mach-aigner@tuwien.ac.at.
BOKU University · ATTU Wien · AT

Funding

Austrian Science Fund FWF P 29556
6 · The paper itself

Abstract

Fungi can produce a wide range of chemical compounds via secondary metabolism. These compounds are of major interest because of their (potential) application in medicine and biotechnology and as a potential source for new therapeutic agents and drug leads. However, under laboratory conditions, most secondary metabolism genes remain silent. This circumstance is an obstacle for the production of known metabolites and the discovery of new secondary metabolites. In this study, we describe the dual role of the transcription factor Xylanase promoter binding protein 1 (Xpp1) in the regulation of both primary and secondary metabolism of Trichoderma reesei Xpp1 was previously described as a repressor of xylanases. Here, we provide data from an RNA-sequencing analysis suggesting that Xpp1 is an activator of primary metabolism. This finding is supported by our results from a Biolog assay determining the carbon source assimilation behavior of an xpp1 deletion strain. Furthermore, the role of Xpp1 as a repressor of secondary metabolism is shown by gene expression analyses of polyketide synthases and the determination of the secondary metabolites of xpp1 deletion and overexpression strains using an untargeted metabolomics approach. The deletion of Xpp1 resulted in the enhanced secretion of secondary metabolites in terms of diversity and quantity. Homologs of Xpp1 are found among a broad range of fungi, including the biocontrol agent Trichoderma atroviride, the plant pathogens Fusarium graminearum and Colletotrichum graminicola, the model organism Neurospora crassa, the human pathogen Sporothrix schenckii, and the ergot fungus Claviceps purpurea.

Indexed as

Secondary MetabolismFungal ProteinsSequence Analysis, RNATranscription FactorsTrichodermaFungal ProteinsTranscription Factorsfungigene regulationlow molecular compoundssecondary metabolismtranscription factor

Identifiers

PMID28074041
PMCPMC5278490
OpenAlexW2569773768

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.