Evidence map›Paper›PMID 28073943›Full record

ArticleNucleic acids research2017

KDM4B/JMJD2B is a p53 target gene that modulates the amplitude of p53 response after DNA damage.

Laura Castellini, Eui Jung Moon, Olga V Razorenova, Adam J Krieg, Rie von Eyben, Amato J Giaccia

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. KDM4 Demethylases: Structure, Function, and Inhibitors.Advances in experimental medicine and biology · 2023
    Article
  8. Article
  9. Article
  10. LncRNAInternational journal of molecular sciences · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. P53-regulated autophagy and its impact on drug resistance and cell fate.Cancer drug resistance (Alhambra, Calif.) · 2021
    Article
  15. Review
  16. Review
  17. Neuronal Transcriptome fromFree neuropathology · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Laura CastelliniDepartment of Radiation Oncology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Eui Jung MoonDepartment of Radiation Oncology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Olga V RazorenovaDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA 92697, USA.
Adam J KriegDepartment of Obstetrics and Gynecology, Oregon Health and Sciences University, Portland, OR 97239, USA.
Rie von EybenDepartment of Radiation Oncology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Amato J GiacciaDepartment of Radiation Oncology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Stanford University · USOregon Health & Science University · USUniversity of California, Irvine · US

Funding

Translational Oncology Research Program (Project-005)P30CA124435 · NCI · STANFORD UNIVERSITY · PI Melinda L. Telli · 2007 to 2026
$71.4M
TUMOR HYPOXIA--MOLECULAR STUDIES &CLINICAL EXPLOITATIONP01CA067166 · NCI · STANFORD UNIVERSITY · PI LE, QUYNH-THU XUAN · 1996 to 2017
$25.5M
The Impact of Mitochondrial Repression and Lipid Accumulation by HIF on Tumor GrowthR35CA197713 · NCI · STANFORD UNIVERSITY · PI GIACCIA, AMATO J. · 2015 to 2021
$5.3M
Preclinical Testing of a Novel Therapy Targeting AXL in Advanced Kidney CancerR01CA198291 · NCI · STANFORD UNIVERSITY · PI RANKIN, ERINN B · 2016 to 2020
$2.4M
Postdoctoral Training in the Radiation ScincesT32CA121940 · NCI · STANFORD UNIVERSITY · PI GRAVES, EDWARD E. · 2007 to 2018
$2.1M
NCI NIH HHS P01 CA067166NCI NIH HHS P30 CA124435NCI NIH HHS R01 CA198291NCI NIH HHS R35 CA197713NCI NIH HHS T32 CA121940
6 · The paper itself

Abstract

The p53 tumor suppressor protein plays a critical role in orchestrating the genomic response to various stress signals by acting as a master transcriptional regulator. Differential gene activity is controlled by transcription factors but also dependent on the underlying chromatin structure, especially on covalent histone modifications. After screening different histone lysine methyltransferases and demethylases, we identified JMJD2B/KDM4B as a p53-inducible gene in response to DNA damage. p53 directly regulates JMJD2B gene expression by binding to a canonical p53-consensus motif in the JMJD2B promoter. JMJD2B induction attenuates the transcription of key p53 transcriptional targets including p21, PIG3 and PUMA, and this modulation is dependent on the catalytic capacity of JMJD2B. Conversely, JMJD2B silencing led to an enhancement of the DNA-damage driven induction of p21 and PIG3. These findings indicate that JMJD2B acts in an auto-regulatory loop by which p53, through JMJD2B activation, is able to influence its own transcriptional program. Functionally, exogenous expression of JMJD2B enhanced subcutaneous tumor growth of colon cancer cells in a p53-dependent manner, and genetic inhibition of JMJD2B impaired tumor growth in vivo. These studies provide new insights into the regulatory effect exerted by JMJD2B on tumor growth through the modulation of p53 target genes.

Indexed as

DNA DamageEpigenesis, GeneticAnimalsCell LineCells, CulturedHistone DemethylasesHistone-Lysine N-MethyltransferaseHumansJumonji Domain-Containing Histone DemethylasesMiceMutagensNeoplasmsPromoter Regions, GeneticTranscriptional ActivationTumor Suppressor Protein p53Histone DemethylasesHistone-Lysine N-MethyltransferaseJumonji Domain-Containing Histone DemethylasesKDM4B protein, humanMutagensTumor Suppressor Protein p53

Identifiers

PMID28073943
PMCPMC5397198
OpenAlexW2567966196

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.