Evidence map›Paper›PMID 28073929›Full record

ArticleFEMS yeast research2017

Improving heterologous production of phenylpropanoids in Saccharomyces cerevisiae by tackling an unwanted side reaction of Tsc13, an endogenous double-bond reductase.

Beata Joanna Lehka, Michael Eichenberger, Walden Emil Bjørn-Yoshimoto, Katherina Garcia Vanegas, Nicolaas Buijs, Niels Bjerg Jensen, Jane Dannow Dyekjær, Håvard Jenssen, Ernesto Simon, Michael Naesby

Open access · hybridAbstract read
In one paragraph

Article in FEMS yeast research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
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  5. Raspberry Ketone Accumulation inJournal of agricultural and food chemistry · 2023
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  6. Optimization of Pinocembrin Biosynthesis inACS synthetic biology · 2023
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  7. AACS synthetic biology · 2022
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  8. Article
  9. Review
  10. Article
  11. Metabolic engineering communications · 2022
    Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Yeasts as Biopharmaceutical Production Platforms.Frontiers in fungal biology · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Beata Joanna LehkaEvolva Biotech A/S, Lersø Parkallé 42, DK-2100, Copenhagen Ø, Denmark.
Michael EichenbergerEvolva SA, Duggingerstrasse 23, CH-4153, Reinach, Switzerland.
Walden Emil Bjørn-YoshimotoDepartment of Drug Design and Pharmacology, University of Copenhagen, Jagtvej 162, DK-2100, Copenhagen Ø, Denmark.
Katherina Garcia VanegasEvolva Biotech A/S, Lersø Parkallé 42, DK-2100, Copenhagen Ø, Denmark.
Nicolaas BuijsEvolva Biotech A/S, Lersø Parkallé 42, DK-2100, Copenhagen Ø, Denmark.
Niels Bjerg JensenEvolva Biotech A/S, Lersø Parkallé 42, DK-2100, Copenhagen Ø, Denmark.
Jane Dannow DyekjærEvolva Biotech A/S, Lersø Parkallé 42, DK-2100, Copenhagen Ø, Denmark.
Håvard JenssenDepartment of Science and Environment, Roskilde University, Universitetsvej 1, DK-4000, Roskilde, Denmark.
Ernesto SimonEvolva Biotech A/S, Lersø Parkallé 42, DK-2100, Copenhagen Ø, Denmark.
Michael NaesbyEvolva SA, Duggingerstrasse 23, CH-4153, Reinach, Switzerland.
Evolva (Denmark) · DKEvolva (Switzerland) · CHRoskilde University · DKUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phenylpropanoids, such as flavonoids and stilbenoids, are of great commercial interest, and their production in Saccharomyces cerevisiae is a very promising strategy. However, to achieve commercially viable production, each step of the process must be optimised. We looked at carbon loss, known to occur in the heterologous flavonoid pathway in yeast, and identified an endogenous enzyme, the enoyl reductase Tsc13, which turned out to be responsible for the accumulation of phloretic acid via reduction of p-coumaroyl-CoA. Tsc13 is an essential enzyme involved in fatty acid synthesis and cannot be deleted. Hence, two approaches were adopted in an attempt to reduce the side activity without disrupting the natural function: site saturation mutagenesis identified a number of amino acid changes which slightly increased flavonoid production but without reducing the formation of the side product. Conversely, the complementation of TSC13 by a plant gene homologue essentially eliminated the unwanted side reaction, while retaining the productivity of phenylpropanoids in a simulated fed batch fermentation.

Indexed as

Genes, EssentialHeterocyclic CompoundsMetabolic EngineeringMutant ProteinsOxidoreductases Acting on CH-CH Group DonorsRecombinant ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsHeterocyclic CompoundsMutant ProteinsOxidoreductases Acting on CH-CH Group DonorsRecombinant ProteinsSaccharomyces cerevisiae ProteinsTSC13 protein, S cerevisiaeflavonoidsphloretic acidSaccharomyces cerevisiaeTSC13

Identifiers

PMID28073929
PMCPMC5815076
OpenAlexW2570653743

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.