Evidence map›Paper›PMID 28073912›Full record

ArticleThe Journal of biological chemistry2017

Distinct Features of Cyanophage-encoded T-type Phycobiliprotein Lyase ΦCpeT: THE ROLE OF AUXILIARY METABOLIC GENES.

Raphael Gasper, Julia Schwach, Jana Hartmann, Andrea Holtkamp, Jessica Wiethaus, Natascha Riedel, Eckhard Hofmann, Nicole Frankenberg-Dinkel

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  8. Review
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  11. Structures and enzymatic mechanisms of phycobiliprotein lyases CpcE/F and PecE/F.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Raphael GasperProtein Crystallography Group.
Julia SchwachPhysiology of Microorganisms Group, Faculty for Biology and Biotechnology, Ruhr University Bochum, 44780 Bochum.
Jana HartmannDepartment of Biology, Division for Microbiology, Technical University Kaiserslautern, 67663 Kaiserslautern, Germany.
Andrea HoltkampPhysiology of Microorganisms Group, Faculty for Biology and Biotechnology, Ruhr University Bochum, 44780 Bochum.
Jessica WiethausPhysiology of Microorganisms Group, Faculty for Biology and Biotechnology, Ruhr University Bochum, 44780 Bochum.
Natascha RiedelDepartment of Biology, Division for Microbiology, Technical University Kaiserslautern, 67663 Kaiserslautern, Germany.
Eckhard HofmannProtein Crystallography Group.
Nicole Frankenberg-DinkelPhysiology of Microorganisms Group, Faculty for Biology and Biotechnology, Ruhr University Bochum, 44780 Bochum; Department of Biology, Division for Microbiology, Technical University Kaiserslautern, 67663 Kaiserslautern, Germany. Electronic address: nfranken@bio.uni-kl.de.
Ruhr University Bochum · DEInstitute of Crystallography · ITUniversity of Kaiserslautern · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxiliary metabolic genes (AMG) are commonly found in the genomes of phages that infect cyanobacteria and increase the fitness of the cyanophage. AMGs are often homologs of host genes, and also typically related to photosynthesis. For example, the Φ

Indexed as

BacteriophagesCrystallography, X-RayLyasesModels, MolecularNostocPhycobilinsPhycobiliproteinsPhycoerythrinProchlorococcusProtein ConformationViral ProteinsLyasesPhycobilinsPhycobiliproteinsPhycoerythrinphycoerythrobilinViral Proteinsbacteriophagemicrobiologyphotosynthetic pigmentprotein crystallizationviral protein

Identifiers

PMID28073912
PMCPMC5336146
OpenAlexW2569912045

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.