ArticleFunctional & integrative genomics2017
Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency.
Article in Functional & integrative genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
18 citing papers in PubMed, 33 citations in OpenAlex.
- Insights into lncRNA-mediated regulatory networks in Hevea brasiliensis under anthracnose stress.Plant methods · 2024Article
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- Analysis of miRNAs responsive to long-term calcium deficiency in tef (Plant direct · 2022Article
- Integration of small RNA, degradome, and transcriptome sequencing data illustrates the mechanism of low phosphorus adaptation inFrontiers in plant science · 2022Article
- Noncoding-RNA-Mediated Regulation in Response to Macronutrient Stress in Plants.International journal of molecular sciences · 2021Review
- Genetics of Germination and Seedling Traits under Drought Stress in a MAGIC Population of Maize.Plants (Basel, Switzerland) · 2021Article
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- Whole Genome Sequencing and Comparative Genomic Analysis Reveal Allelic Variations Unique to a Purple Colored Rice Landrace (Frontiers in plant science · 2019Article
- Deciphering genome-wide WRKY gene family of Triticum aestivum L. and their functional role in response to Abiotic stress.Genes & genomics · 2019Article
- Identification of Arbuscular Mycorrhiza Fungi Responsive microRNAs and Their Regulatory Network in Maize.International journal of molecular sciences · 2018Article
- Extrapolation of significant genes and transcriptional regulatory networks involved in Zea mays in response in UV-B stress.Genes & genomics · 2018Article
- Analysis of physiological and miRNA responses to Pi deficiency in alfalfa (Medicago sativa L.).Plant molecular biology · 2018Article
- Article
- Identification of two novel chicken GPR133 variants and their expression in different tissues.Functional & integrative genomics · 2017Article
- MicroRNAs in model and complex organisms.Functional & integrative genomics · 2017Article
- Article
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- Transcriptomic Analysis of Soil GrownFrontiers in plant science · 2017Article
Corrections and comments
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Authors and funding
4 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Globally important cereal crop maize provides important nutritions and starch in dietary foods. Low phosphate (LPi) availability in the soil frequently limits the maize quality and yield across the world. Small non-coding RNAs (Snc-RNAs) play crucial roles in growth and adaptation of plants to the environment. Snc-RNAs like microRNAs (miRs) and trans-acting small interfering RNAs (Tasi-Rs) play important functions in posttranscriptional regulation of gene expression, which controls plant development, reproduction, and biotic/abiotic stress responses. In order to identify the miR and Tasi-R alterations in leaf and root of maize in response to sufficient phosphate and LPi at 3LS and 4LS, the snc-RNA population libraries for 0th, 1st, 2nd, 4th, and 8th day were constructed. These libraries were used for genome-wide alignment and RNA-fold analysis for possible prediction of potential miRs and Tasi-Rs. This study reported 174 known and conserved differentially expressed miRs of 27 miR families of maize plant. In addition, leaf and root specific potential novel miRs representing 155 new families were also discovered. Differentially expressed conserved as well as novel miR functions in root and leaf during early stage of Pi starvation were extensively discussed. Leaf and root specific miRs as well as common miRs with their target genes, participating in different biological, cellular, and metabolic processes were explored. Further, four miR390-directed Tasi-Rs which belong to TAS3 gene family along with other orthologs of Tasi-Rs were also identified. Finally, the study provides an insight into the composite regulatory mechanism of miRs in maize in response to Pi deficiency.
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