Evidence map›Paper›PMID 28069884›Full record

ArticleThe Journal of antimicrobial chemotherapy2017

Purification of Zika virus RNA-dependent RNA polymerase and its use to identify small-molecule Zika inhibitors.

Hong-Tao Xu, Said A Hassounah, Susan P Colby-Germinario, Maureen Oliveira, Clare Fogarty, Yudong Quan, Yingshan Han, Olga Golubkov, Ilinca Ibanescu, Bluma Brenner and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
11.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 68 citations in OpenAlex.

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  17. Identification and Characterization of Zika Virus NS5 Methyltransferase Inhibitors.Frontiers in cellular and infection microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Hong-Tao XuJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Said A HassounahJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Susan P Colby-GerminarioJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Maureen OliveiraJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Clare FogartyJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Yudong QuanJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Yingshan HanJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Olga GolubkovJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Ilinca IbanescuJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Bluma BrennerJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
Brent R StranixChamplain Exploration Pharma Inc., Montreal, Quebec, Canada.
Mark A WainbergJewish General Hospital, McGill University AIDS Centre, Lady Davis Institute for Medical Research, Montreal, Quebec, Canada.
McGill University · CAJewish General Hospital · CAChamplain Regional College · CA

Funding

CIHR CCM104886
6 · The paper itself

Abstract

Background: The viral RNA-dependent RNA polymerase (RdRp) enzymes of the Flaviviridae family are essential for viral replication and are logically important targets for development of antiviral therapeutic agents. Zika virus (ZIKV) is a rapidly re-emerging human pathogen for which no vaccine or antiviral agent is currently available. Methods: To facilitate development of ZIKV RdRp inhibitors, we have established an RdRp assay using purified recombinant ZIKV NS5 polymerase. Results: We have shown that both the hepatitis C virus (HCV) nucleoside inhibitor sofosbuvir triphosphate and a pyridoxine-derived non-nucleoside small-molecule inhibitor, DMB213, can act against ZIKV RdRp activity at IC 50 s of 7.3 and 5.2 μM, respectively, in RNA synthesis reactions catalysed by recombinant ZIKV NS5 polymerase. Cell-based assays confirmed the anti-ZIKV activity of sofosbuvir and DMB213 with 50% effective concentrations (EC 50 s) of 8.3 and 4.6 μM, respectively. Control studies showed that DMB213 did not inhibit recombinant HIV-1 reverse transcriptase and showed only very weak inhibition of HIV-1 integrase strand-transfer activity. The S604T substitution in motif B of the ZIKV RdRp, which corresponds to the S282T substitution in motif B of HCV RdRp, which confers resistance to nucleotide inhibitors, also conferred resistance to sofosbuvir triphosphate, but not to DMB213. Enzyme assays showed that DMB213 appears to be competitive with natural nucleoside triphosphate (NTP) substrates. Conclusions: Recombinant ZIKV RdRp assays can be useful tools for the screening of both nucleos(t)ide compounds and non-nucleotide metal ion-chelating agents that interfere with ZIKV replication.

Indexed as

Antiviral AgentsDrug DiscoveryEnzyme InhibitorsHIV IntegraseHIV Reverse TranscriptaseRecombinant ProteinsRNA-Dependent RNA PolymeraseRNA, ViralSofosbuvirVirus ReplicationZika VirusAntiviral AgentsEnzyme InhibitorsHIV IntegraseHIV Reverse Transcriptasep31 integrase protein, Human immunodeficiency virus 1Recombinant Proteinsreverse transcriptase, Human immunodeficiency virus 1RNA-Dependent RNA PolymeraseRNA, ViralSofosbuvir

Identifiers

PMID28069884
PMCPMC5890664
OpenAlexW2570153052

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.