Evidence map›Paper›PMID 28062033›Full record

ArticleMethods in enzymology2017

High-Resolution Optical Tweezers Combined With Single-Molecule Confocal Microscopy.

K D Whitley, M J Comstock, Y R Chemla

Abstract read
In one paragraph

Article in Methods in enzymology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Optical Tweezers to Study Viruses.Sub-cellular biochemistry · 2024
    Review
  6. Article
  7. Article
  8. Assignment of structural transitions during mechanical unwrapping of nucleosomes and their disassembly products.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Article
  11. DNA replication machinery: Insights fromComputational and structural biotechnology journal · 2021
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

K D WhitleyUniversity of Illinois at Urbana-Champaign, Urbana, IL, United States.
M J ComstockMichigan State University, East Lansing, MI, United States.
Y R ChemlaUniversity of Illinois at Urbana-Champaign, Urbana, IL, United States; Center for the Physics of Living Cells, University of Illinois at Urbana-Champaign, Urbana, IL, United States. Electronic address: ychemla@illinois.edu.

Funding

Mechanisms of regulation of DNA repair helicasesR01GM120353 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CHEMLA, YANN R. · 2016 to 2020
$1.4M
Combined ultrahigh-resolution optical tweezers and single-molecule fluorescenceR21RR025341 · NCRR · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CHEMLA, YANN R. · 2009 to 2010
$535k
NCRR NIH HHS R21 RR025341NIGMS NIH HHS R01 GM120353
6 · The paper itself

Abstract

We describe the design, construction, and application of an instrument combining dual-trap, high-resolution optical tweezers and a confocal microscope. This hybrid instrument allows nanomechanical manipulation and measurement simultaneously with single-molecule fluorescence detection. We present the general design principles that overcome the challenges of maximizing optical trap resolution while maintaining single-molecule fluorescence sensitivity, and provide details on the construction and alignment of the instrument. This powerful new tool is just beginning to be applied to biological problems. We present step-by-step instructions on an application of this technique that highlights the instrument's capabilities, detecting conformational dynamics in a nucleic acid-processing enzyme.

Indexed as

Optical TweezersDNA HelicasesMicroscopy, ConfocalMicroscopy, FluorescenceNanotechnologySingle Molecule ImagingDNA HelicasesConfocal microscopyFörster Resonance Energy TransferFRETHelicaseOptical trappingOptical tweezersSingle-molecule fluorescenceUvrD

Identifiers

PMID28062033
PMCPMC5540136

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.