Evidence map›Paper›PMID 28061432›Full record

ArticleOncotarget2017

Identification and functional analysis of a novel LHX1 mutation associated with congenital absence of the uterus and vagina.

Wei Zhang, Xueya Zhou, Liyang Liu, Ying Zhu, Chunmei Liu, Hong Pan, Qiong Xing, Jing Wang, Xi Wang, Xuegong Zhang and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Building a stem cell-based primate uterus.Communications biology · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Development of the human female reproductive tract.Differentiation; research in biological diversity
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 2 countries.

Wei ZhangReproductive Medicine Center, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Xueya ZhouMOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic and Systems Biology, TNLIST/Department of Automation, Tsinghua University, Beijing, China.
Liyang LiuMOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic and Systems Biology, TNLIST/Department of Automation, Tsinghua University, Beijing, China.
Ying ZhuReproductive Medicine Center, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Chunmei LiuDepartment of Obstetrics and Gynecology, Peking Union Medical College Hospital, Beijing, China.
Hong PanCenter for Genetics, National Research Institute for Family Planning, Beijing, China.
Qiong XingReproductive Medicine Center, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Jing WangDepartment of Medical Genetics, School of Basic Medical Sciences, Capital Medical University, Beijing, China.
Xi WangCenter for Genetics, National Research Institute for Family Planning, Beijing, China.
Xuegong ZhangMOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic and Systems Biology, TNLIST/Department of Automation, Tsinghua University, Beijing, China.
Yunxia CaoReproductive Medicine Center, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Binbin WangGraduate School, Peking Union Medical College, Beijing, China.
Anhui Medical University · CNTsinghua University · CNCapital Medical University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNFirst Affiliated Hospital of Anhui Medical University · CNPeking Union Medical College Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Congenital absence of the uterus and vagina (CAUV) is the most extreme female Müllerian duct abnormality. Several researches proposed that genetic factors contributed to this disorder, whereas the precise genetic mechanism is far from full elucidation. Here, utilizing whole-exome sequencing (WES), we identified one novel missense mutation in LHX1 (NM_005568: c.G1108A, p.A370T) in one of ten unrelated patients diagnosed with CAUV. This mutation was absent from public databases and our internal database. Through the luciferase reporter analysis, we found that the mutation could change the transcriptional activity of LHX1 and its effect on the regulation of the downstream target gene GSC, which might be associated with urogenital system development. In short, we concluded that the LHX1 may be a pathogenic gene of CAUV. Our results demonstrate the power of whole exome sequencing and gene prioritization approach as diagnostic tools in clinical practice that help make genetic diagnosis of CAUV.

Indexed as

Mutation, Missense46, XX Disorders of Sex DevelopmentCongenital AbnormalitiesDNA Mutational AnalysisExome SequencingFemaleGene Expression RegulationGenetic Association StudiesGenetic MarkersGenetic Predisposition to DiseaseGoosecoid ProteinHEK293 CellsHumansLIM-Homeodomain ProteinsMullerian DuctsPhenotypeGenetic MarkersGoosecoid ProteinGSC protein, humanLHX1 protein, humanLIM-Homeodomain ProteinsTranscription Factorscongenital absence of the uterus and vaginaLHX1Müllerian duct abnormalitytranscriptional activitywhole exome sequencing

Identifiers

PMID28061432
PMCPMC5352441
OpenAlexW2562023424

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.