Evidence map›Paper›PMID 28060284›Full record

ArticleJournal of visualized experiments : JoVE2016

Visualizing the Effects of Sputum on Biofilm Development Using a Chambered Coverglass Model.

Trevor Beaudoin, Sarah Kennedy, Yvonne Yau, Valerie Waters

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Co-Operative Biofilm Interactions betweenJournal of fungi (Basel, Switzerland) · 2022
    Article
  3. Article
  4. NPJ biofilms and microbiomes · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Trevor BeaudoinPhysiology and Experimental Medicine, Hospital for Sick Children; trevor.beaudoin@sickkids.ca.
Sarah KennedyDepartment of Clinical Microbiology, Royal College of Surgeons in Ireland.
Yvonne YauDepartment of Laboratory Medicine and Pathobiology, University of Toronto.
Valerie WatersDepartment of Pediatrics, University of Toronto.
University of Toronto · CARoyal College of Surgeons in Ireland · IESickKids Foundation · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biofilms consist of groups of bacteria encased in a self-secreted matrix. They play an important role in industrial contamination as well as in the development and persistence of many health related infections. One of the most well described and studied biofilms in human disease occurs in chronic pulmonary infection of cystic fibrosis patients. When studying biofilms in the context of the host, many factors can impact biofilm formation and development. In order to identify how host factors may affect biofilm formation and development, we used a static chambered coverglass method to grow biofilms in the presence of host-derived factors in the form of sputum supernatants. Bacteria are seeded into chambers and exposed to sputum filtrates. Following 48 hr of growth, biofilms are stained with a commercial biofilm viability kit prior to confocal microscopy and analysis. Following image acquisition, biofilm properties can be assessed using different software platforms. This method allows us to visualize key properties of biofilm growth in presence of different substances including antibiotics.

Indexed as

Anti-Bacterial AgentsBiofilmsCystic FibrosisHumansRespiratory Tract InfectionsSputumAnti-Bacterial Agents

Identifiers

PMID28060284
PMCPMC5226415
OpenAlexW2567682974

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.