Evidence map›Paper›PMID 28059139›Full record

ArticleScientific reports2017

Disulfide isomerase-like protein AtPDIL1-2 is a good candidate for trichlorophenol phytodetoxification.

Ri-He Peng, Jin Qiu, Yong-Sheng Tian, Jian-Jie Gao, Hong-Juan Han, Xiao-Yan Fu, Bo Zhu, Jing Xu, Bo Wang, Zhen-Jun Li and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Ri-He PengAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Jin QiuAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Yong-Sheng TianAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Jian-Jie GaoAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Hong-Juan HanAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Xiao-Yan FuAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Bo ZhuAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Jing XuAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Bo WangAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Zhen-Jun LiAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Li-Juan WangAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Quan-Hong YaoAgro-Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences; Shanghai Key Laboratory of Agricultural Genetics and Breeding, 2901 Beidi Rd., Shanghai, People's Republic of China.
Shanghai Academy of Agricultural Sciences · CNAgroBio · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trichlorophenol (TCP) is a widely used and persistent environmentally toxic compound that poses a carcinogenic risk to humans. Phytoremediation is a proficient cleanup technology for organic pollutants. In this study, we found that the disulfide isomerase-like protein AtPDIL1-2 in plants is a good candidate for enhancing 2,4,6-TCP phytoremediation. The expression of AtPDIL1-2 in Arabidopsis was induced by 2,4,6-TCP. The heterologously expressed AtPDIL1-2 in Escherichia coli exhibited both oxidase and isomerase activities as protein disulfide isomerase and improved bacteria tolerance to 2,4,6-TCP. Further research revealed that transgenic tobacco overexpressing AtPDIL1-2 was more tolerant to high concentrations of 2,4,6-TCP and removed the toxic compound at far greater rates than the control plants. To elucidate the mechanism of action of AtPDIL1-2, we investigated the chemical interaction of AtPDIL1-2 with 2,4,6-TCP for the first time. HPLC analysis implied that AtPDIL1-2 exerts a TCP-binding activity. A suitable configuration of AtPDIL1-2-TCP binding was obtained by molecular docking studies using the AutoDock program. It predicted that the TCP binding site is located in the b-b' domain of AtPDIL1-2 and that His254 of the protein is critical for the binding interaction. These findings imply that AtPDIL1-2 can be used for TCP detoxification by the way of overexpression in plants.

Indexed as

ArabidopsisArabidopsis ProteinsBiodegradation, EnvironmentalChlorophenolsEnvironmental PollutantsEscherichia coliEscherichia coli ProteinsNicotianaPlants, Genetically ModifiedProtein Disulfide-IsomerasesRecombinant ProteinsStress, Physiological2,4,6-trichlorophenolArabidopsis ProteinsChlorophenolsEnvironmental PollutantsEscherichia coli ProteinsProtein Disulfide-IsomerasesRecombinant Proteins

Identifiers

PMID28059139
PMCPMC5216352
OpenAlexW2570835383

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.