Evidence map›Paper›PMID 28059088›Full record

ArticleScientific reports2017

Insights into the Mechanistic Basis of Plasmid-Mediated Colistin Resistance from Crystal Structures of the Catalytic Domain of MCR-1.

Philip Hinchliffe, Qiu E Yang, Edward Portal, Tom Young, Hui Li, Catherine L Tooke, Maria J Carvalho, Neil G Paterson, Jürgen Brem, Pannika R Niumsup and 11 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 138 citations in OpenAlex.

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  12. Pathogens (Basel, Switzerland) · 2024
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 3 countries.

Philip HinchliffeSchool of Cellular and Molecular Medicine, University of Bristol, Bristol BS8 1TD, UK.
Qiu E YangInstitute of Infection and Immunity, Cardiff University, Cardiff CF14 4XN, UK.
Edward PortalInstitute of Infection and Immunity, Cardiff University, Cardiff CF14 4XN, UK.
Tom YoungSchool of Chemistry, University of Bristol, Bristol BS8 1TS, UK.
Hui LiBeijing Advanced Innovation Center for Food Nutrition and Human Health, College of Veterinary Medicine, China Agricultural University, Beijing, China.
Catherine L TookeSchool of Cellular and Molecular Medicine, University of Bristol, Bristol BS8 1TD, UK.
Maria J CarvalhoInstitute of Infection and Immunity, Cardiff University, Cardiff CF14 4XN, UK.
Neil G PatersonDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK.
Jürgen BremDepartment of Chemistry, University of Oxford, Oxford OX1 3TA, UK.
Pannika R NiumsupDepartment of Microbiology and Parasitology, Faculty of Medical Science, Naresuan University, Phitsanulok, 65000, Thailand.
Uttapoln TansawaiDepartment of Microbiology and Parasitology, Faculty of Medical Science, Naresuan University, Phitsanulok, 65000, Thailand.
Lei LeiBeijing Advanced Innovation Center for Food Nutrition and Human Health, College of Veterinary Medicine, China Agricultural University, Beijing, China.
Mei LiBeijing Advanced Innovation Center for Food Nutrition and Human Health, College of Veterinary Medicine, China Agricultural University, Beijing, China.
Zhangqi ShenBeijing Advanced Innovation Center for Food Nutrition and Human Health, College of Veterinary Medicine, China Agricultural University, Beijing, China.
Yang WangBeijing Advanced Innovation Center for Food Nutrition and Human Health, College of Veterinary Medicine, China Agricultural University, Beijing, China.
Christopher J SchofieldDepartment of Chemistry, University of Oxford, Oxford OX1 3TA, UK.
Adrian J MulhollandSchool of Chemistry, University of Bristol, Bristol BS8 1TS, UK.
Jianzhong ShenBeijing Advanced Innovation Center for Food Nutrition and Human Health, College of Veterinary Medicine, China Agricultural University, Beijing, China.
Natalie FeySchool of Chemistry, University of Bristol, Bristol BS8 1TS, UK.
Timothy R WalshInstitute of Infection and Immunity, Cardiff University, Cardiff CF14 4XN, UK.
James SpencerSchool of Cellular and Molecular Medicine, University of Bristol, Bristol BS8 1TD, UK.
China Agricultural University · CNUniversity of Bristol · GBCardiff University · GBNaresuan University · THUniversity of Oxford · GBDiamond Light Source · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L01386X/1Biotechnology and Biological Sciences Research Council BB/L018756/1Medical Research Council MR/L007665/1Medical Research Council MR/N002679/1Medical Research Council MR/P007295/1
6 · The paper itself

Abstract

The polymixin colistin is a "last line" antibiotic against extensively-resistant Gram-negative bacteria. Recently, the mcr-1 gene was identified as a plasmid-mediated resistance mechanism in human and animal Enterobacteriaceae, with a wide geographical distribution and many producer strains resistant to multiple other antibiotics. mcr-1 encodes a membrane-bound enzyme catalysing phosphoethanolamine transfer onto bacterial lipid A. Here we present crystal structures revealing the MCR-1 periplasmic, catalytic domain to be a zinc metalloprotein with an alkaline phosphatase/sulphatase fold containing three disulphide bonds. One structure captures a phosphorylated form representing the first intermediate in the transfer reaction. Mutation of residues implicated in zinc or phosphoethanolamine binding, or catalytic activity, restores colistin susceptibility of recombinant E. coli. Zinc deprivation reduces colistin MICs in MCR-1-producing laboratory, environmental, animal and human E. coli. Conversely, over-expression of the disulphide isomerase DsbA increases the colistin MIC of laboratory E. coli. Preliminary density functional theory calculations on cluster models suggest a single zinc ion may be sufficient to support phosphoethanolamine transfer. These data demonstrate the importance of zinc and disulphide bonds to MCR-1 activity, suggest that assays under zinc-limiting conditions represent a route to phenotypic identification of MCR-1 producing E. coli, and identify key features of the likely catalytic mechanism.

Indexed as

Drug Resistance, BacterialAnti-Bacterial AgentsCatalytic DomainColistinCrystallography, X-RayDisulfidesDNA Mutational AnalysisEscherichia coliEscherichia coli ProteinsMetalloproteinsMicrobial Sensitivity TestsModels, MolecularProtein ConformationProtein Disulfide-IsomerasesZincAnti-Bacterial AgentsColistinDisulfidesEscherichia coli ProteinsMCR-1 protein, E coliMetalloproteinsProtein Disulfide-IsomerasesZinc

Identifiers

PMID28059088
PMCPMC5216409
OpenAlexW2570525150

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.