Evidence map›Paper›PMID 28057857›Full record

ArticleRNA (New York, N.Y.)2017

A central role of Cwc25 in spliceosome dynamics during the catalytic phase of pre-mRNA splicing.

Chi-Kang Tseng, Che-Sheng Chung, Hsin-Chou Chen, Soo-Chen Cheng

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Chi-Kang TsengInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan 115, Republic of China.
Che-Sheng ChungInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan 115, Republic of China.
Hsin-Chou ChenInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan 115, Republic of China.
Soo-Chen ChengInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan 115, Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Splicing of precursor mRNA occurs via two consecutive steps of transesterification reaction; both require ATP and several proteins. Despite the energy requirement in the catalytic phase, incubation of the purified spliceosome under proper ionic conditions can elicit competitive reversible transesterification, debranching, and spliced-exon-reopening reactions without the necessity for ATP or other factors, suggesting that small changes in the conformational state of the spliceosome can lead to disparate chemical consequences for the substrate. We show here that Cwc25 plays a central role in modulating the conformational state of the catalytic spliceosome during normal splicing reactions. Cwc25 binds tightly to the spliceosome after the reaction and is then removed from the spliceosome, which normally requires DExD/H-box protein Prp16 and ATP hydrolysis, to allow the occurrence of the second reaction. When deprived of Cwc25, the purified first-step spliceosome catalyzes both forward and reverse splicing reactions under normal splicing conditions without requiring energy. Both reactions are inhibited when Cwc25 is added back, presumably due to the stabilization of first-step conformation. Prp16 is dispensable for the second reaction when splicing is carried out under conditions that destabilize Cwc25. We also show that the purified precatalytic spliceosome can catalyze two steps of the reaction at a low efficiency without requiring Cwc25, Slu7, or Prp18 when incubated under proper conditions. Our study reveals conformational modulation of the spliceosome by Cwc25 and Prp16 in stabilization and destabilization of first-step conformation, respectively, to facilitate the splicing process.

Indexed as

Gene Expression Regulation, FungalRNA SplicingAdenosine TriphosphatasesAdenosine TriphosphateBiocatalysisHydrolysisModels, BiologicalProtein ConformationRibonucleoproteins, Small NuclearRibonucleoprotein, U5 Small NuclearRNA, FungalRNA HelicasesRNA PrecursorsRNA Splicing FactorsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphatasesAdenosine TriphosphateCwc25 protein, S cerevisiaePRP16 protein, S cerevisiaePRP18 protein, S cerevisiaeRibonucleoproteins, Small NuclearRibonucleoprotein, U5 Small NuclearRNA, FungalRNA HelicasesRNA PrecursorsRNA Splicing FactorsSaccharomyces cerevisiae ProteinsSLU7 protein, S cerevisiaeCwc25spliceosomesplicing catalysis

Identifiers

PMID28057857
PMCPMC5340917

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.