Evidence map›Paper›PMID 28056824›Full record

ArticleBMC genomics2017

The emerging landscape of dynamic DNA methylation in early childhood.

Cheng-Jian Xu, Marc Jan Bonder, Cilla Söderhäll, Mariona Bustamante, Nour Baïz, Ulrike Gehring, Soesma A Jankipersadsing, Pieter van der Vlies, Cleo C van Diemen, Bianca van Rijkom and 13 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 4 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 4 syntheses or guidelines pooled it, 70 citations in OpenAlex.

  1. Pooled it
  2. Shared DNA methylation signatures in childhood allergy: The MeDALL study.The Journal of allergy and clinical immunology · 2021
    Pooled it
  3. Pooled it
  4. Epigenome-wide meta-analysis of DNA methylation and childhood asthma.The Journal of allergy and clinical immunology · 2019
    Pooled it
  5. Article
  6. Multi-omics Data Integration.Advances in experimental medicine and biology · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 11 institutions in 6 countries.

Cheng-Jian XuDepartment of Pulmonology, GRIAC Research Institute, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. c.xu@umcg.nl.
Marc Jan BonderDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Cilla SöderhällDepartment of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden.
Mariona BustamanteISGlobal, Centre for Research in Environmental Epidemiology, Barcelona, Spain.
Nour BaïzEpidemiology of Allergic and Respiratory Diseases Department (EPAR), Sorbonne Université, UPMC Univ Paris 06, INSERM, Pierre Louis Institute of Epidemiology and Public Health, Saint-Antoine Medical School, Paris, France.
Ulrike GehringInstitute for Risk Assessment Sciences, Utrecht University, Utrecht, The Netherlands.
Soesma A JankipersadsingDepartment of Pulmonology, GRIAC Research Institute, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Pieter van der VliesDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Cleo C van DiemenDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Bianca van RijkomDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Jocelyne JustEpidemiology of Allergic and Respiratory Diseases Department (EPAR), Sorbonne Université, UPMC Univ Paris 06, INSERM, Pierre Louis Institute of Epidemiology and Public Health, Saint-Antoine Medical School, Paris, France.
Inger KullDepartment of Clinical Science and Education, Stockholm South General Hospital, Karolinska Institutet, and Sachs' Children's Hospital, SE-118 83, Stockholm, Sweden.
Juha KereDepartment of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden.
Josep Maria AntóISGlobal, Centre for Research in Environmental Epidemiology, Barcelona, Spain.
Jean BousquetUniversity Hospital, Montpellier, France.
Alexandra ZhernakovaDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Cisca WijmengaDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Isabella Annesi-MaesanoEpidemiology of Allergic and Respiratory Diseases Department (EPAR), Sorbonne Université, UPMC Univ Paris 06, INSERM, Pierre Louis Institute of Epidemiology and Public Health, Saint-Antoine Medical School, Paris, France.
Jordi SunyerISGlobal, Centre for Research in Environmental Epidemiology, Barcelona, Spain.
Erik MelénDepartment of Paediatric Pulmonology and Paediatric Allergy, Beatrix Children's Hospital, GRIAC Research Institute, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Yang LiDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. y.li01@umcg.nl.
Dirkje S PostmaDepartment of Pulmonology, GRIAC Research Institute, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Gerard H KoppelmanDepartment of Paediatric Pulmonology and Paediatric Allergy, University of Groningen, University Medical Center Groningen, Beatrix Children's Hospital, GRIAC Research Institute, Groningen, The Netherlands.
University Medical Center Groningen · NLUniversity of Groningen · NLHospital del Mar Research Institute · ESInserm · FRCentro de Investigación Biomédica en Red de Epidemiología y Salud Pública · ESFolkhälsans Forskningscentrum · FIInstitut Pierre Louis d‘Épidémiologie et de Santé Publique · FRKarolinska Institutet · SEStockholm South General Hospital · SEUniversité de Versailles Saint-Quentin-en-Yvelines · FRUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDNA methylation has been found to associate with disease, aging and environmental exposure, but it is unknown how genome, environment and disease influence DNA methylation dynamics in childhood.

resultsBy analysing 538 paired DNA blood samples from children at birth and at 4-5 years old and 726 paired samples from children at 4 and 8 years old from four European birth cohorts using the Illumina Infinium Human Methylation 450 k chip, we have identified 14,150 consistent age-differential methylation sites (a-DMSs) at epigenome-wide significance of p < 1.14 × 10

conclusionOur study provides new insights into the dynamic epigenetic landscape of the first 8 years of life.

Indexed as

Child DevelopmentDNA MethylationEpigenesis, GeneticEpigenomicsChildChild, PreschoolCpG IslandsFemaleGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyHumansInfantInfant, NewbornMaternal ExposurePregnancyAgingDNA methylationMaternal smokingMethylation quantitative trait loci

Identifiers

PMID28056824
PMCPMC5217260
OpenAlexW2568619240

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.