Evidence map›Paper›PMID 28056736›Full record

ArticleCurrent rheumatology reviews2017

Case-control Association Study of Autoimmunity Associated Variants in PDCD1 and Juvenile Idiopathic Arthritis.

Christina Tejeda, Alaine K Broadaway, Michael J Ombrello, Milton R Brown, Lori A Ponder, Mina Rohani Pichavant, Gabriel Wang, Sheila Angeles-Han, Aimee Hersh, John Bohnsack and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Current rheumatology reviews, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Christina TejedaDepartment of Pediatrics Emory University School of Medicine, Atlanta. United States.
Alaine K BroadawayDepartment of Human Genetics, Emory University School of Medicine, Atlanta. United States.
Michael J OmbrelloTranslational Genetics and Genomics Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases. United States.
Milton R BrownDepartment of Pediatrics Emory University School of Medicine, Atlanta. United States.
Lori A PonderChildren's Health Care of Atlanta, Atlanta, GA. United States.
Mina Rohani PichavantDepartment of Pediatrics Emory University School of Medicine, Atlanta. United States.
Gabriel WangDepartment of Pediatrics Emory University School of Medicine, Atlanta. United States.
Sheila Angeles-HanChildren's Health Care of Atlanta, Atlanta, GA. United States.
Aimee HershDivision of Pediatric Immunology and Rheumatology, University of Utah, Salt Lake City. United States.
John BohnsackDivision of Pediatric Immunology and Rheumatology, University of Utah, Salt Lake City. United States.
Karen N ConneelyDepartment of Human Genetics, Emory University School of Medicine, Atlanta. United States.
Michael EpsteinDepartment of Human Genetics, Emory University School of Medicine, Atlanta. United States.
Sampath PrahaladDepartment of Human Genetics, Emory University School of Medicine, Atlanta. United States.
Emory University · USChildren's Healthcare of Atlanta · USUniversity of Utah · USNational Institute of Arthritis and Musculoskeletal and Skin Diseases · US

Funding

Genetics and pathophysiology of systemic juvenile idiopathic arthritis and other complex autoinflammatory diseasesZIAAR041198 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI OMBRELLO, MICHAEL · 2014 to 2025
$14.4M
Intramural NIH HHS Z99 AR999999
6 · The paper itself

Abstract

purposeVariants in the gene encoding Programmed Cell Death-1 (PDCD1) have been associated with susceptibility to Systemic Lupus Erythematosus and other autoimmune diseases. Given that clinically distinct autoimmune phenotypes share common genetic susceptibility factors, variants in PDCD-1 were tested for a possible association with Juvenile Idiopathic Arthritis (JIA).

methodsFour Single Nucleotide Polymorphisms (SNPS) in the PDCD1 gene were genotyped and analyzed: rs7421861, rs11568821, rs10204525, and rs7568402 in 834 cases and 855 controls of Northern European ancestry. Each variant was examined for possible associations with JIA and then analyzed for association with JIA categories.

resultsPDCD1 variants showed no association with JIA in the cohort overall (rs7421861 p=0.63, rs11568821 p=0.13, rs10204525 p=0.31, and rs7568402 p=0.45). Stratification by JIA categories indicated a significant association between systemic JIA and PDCD1 rs7568402 (OR=0.53, p=0.0027), which remained significant after 10,000 permutations, but was not replicated in an independent multi-ethnic systemic JIA cohort. A nominal association between enthesitis-related arthritis and rs115668821 was also observed (OR=0.22, p=0.012).

conclusionUnlike other multiple autoimmune disease associated genetic variants, there was no association between PDCD1 variants and JIA or JIA categories.

Indexed as

Arthritis, JuvenileAutoimmune DiseasesAutoimmunityCase-Control StudiesChildFemaleGenetic Predisposition to DiseaseGenotypeHumansMalePolymorphism, Single NucleotideProgrammed Cell Death 1 ReceptorPDCD1 protein, humanProgrammed Cell Death 1 ReceptorassociationgeneticsJuvenile arthritisjuvenile idiopathic arthritisPDCD1single nucleotide polymorphisms

Identifiers

PMID28056736
PMCPMC5759045
OpenAlexW2781273029

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.