Evidence map›Paper›PMID 28056071›Full record

ArticlePloS one2017

Species-Specific Responses of Juvenile Rockfish to Elevated pCO2: From Behavior to Genomics.

Scott L Hamilton, Cheryl A Logan, Hamilton W Fennie, Susan M Sogard, James P Barry, April D Makukhov, Lauren R Tobosa, Kirsten Boyer, Christopher F Lovera, Giacomo Bernardi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 63 citations in OpenAlex.

  1. Tolerance to future elevated COJournal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2026
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  16. Elevated COGlobal change biology · 2019
    Article
  17. Article
  18. Aerobic capacities and swimming performance of polar cod (The Journal of experimental biology · 2018
    Article
  19. The neurobiology of climate change.Die Naturwissenschaften · 2018
    Article
  20. Juvenile rockfish show resilience to COConservation physiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Scott L HamiltonMoss Landing Marine Laboratories, Moss Landing, California, United States of America.
Cheryl A LoganCalifornia State University Monterey Bay, Seaside, California, United States of America.
Hamilton W FennieMoss Landing Marine Laboratories, Moss Landing, California, United States of America.
Susan M SogardNational Marine Fisheries Service, Southwest Fisheries Science Center, Santa Cruz, California, United States of America.
James P BarryMonterey Bay Aquarium Research Institute, Moss Landing, California, United States of America.
April D MakukhovCalifornia State University Monterey Bay, Seaside, California, United States of America.
Lauren R TobosaCalifornia State University Monterey Bay, Seaside, California, United States of America.
Kirsten BoyerCalifornia State University Monterey Bay, Seaside, California, United States of America.
Christopher F LoveraMonterey Bay Aquarium Research Institute, Moss Landing, California, United States of America.
Giacomo BernardiDepartment of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, California, United States of America.
California State University, Monterey Bay · USMonterey Bay Aquarium Research Institute · USMoss Landing Marine Laboratories · USNOAA National Marine Fisheries Service · USUniversity of California, Santa Cruz · US

Funding

Genome Sequencer FLXS10RR029668 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI NGAI, JOHN J. · 2010 to 2010
$623k
Illumina Sequencer to Facilitate Functional Genomics at BerkeleyS10RR027303 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI TAYLOR, JOHN W. · 2010 to 2010
$500k
NCRR NIH HHS S10 RR027303NCRR NIH HHS S10 RR029668
6 · The paper itself

Abstract

In the California Current ecosystem, global climate change is predicted to trigger large-scale changes in ocean chemistry within this century. Ocean acidification-which occurs when increased levels of atmospheric CO2 dissolve into the ocean-is one of the biggest potential threats to marine life. In a coastal upwelling system, we compared the effects of chronic exposure to low pH (elevated pCO2) at four treatment levels (i.e., pCO2 = ambient [500], moderate [750], high [1900], and extreme [2800 μatm]) on behavior, physiology, and patterns of gene expression in white muscle tissue of juvenile rockfish (genus Sebastes), integrating responses from the transcriptome to the whole organism level. Experiments were conducted simultaneously on two closely related species that both inhabit kelp forests, yet differ in early life history traits, to compare high-CO2 tolerance among species. Our findings indicate that these congeners express different sensitivities to elevated CO2 levels. Copper rockfish (S. caurinus) exhibited changes in behavioral lateralization, reduced critical swimming speed, depressed aerobic scope, changes in metabolic enzyme activity, and increases in the expression of transcription factors and regulatory genes at high pCO2 exposure. Blue rockfish (S. mystinus), in contrast, showed no significant changes in behavior, swimming physiology, or aerobic capacity, but did exhibit significant changes in the expression of muscle structural genes as a function of pCO2, indicating acclimatization potential. The capacity of long-lived, late to mature, commercially important fish to acclimatize and adapt to changing ocean chemistry over the next 50-100 years is likely dependent on species-specific physiological tolerances.

Indexed as

AnimalsBehavior, AnimalCarbon DioxideGenomicsPerciformesPrincipal Component AnalysisTranscription FactorsCarbon DioxideTranscription Factors

Identifiers

PMID28056071
PMCPMC5215853
OpenAlexW2570495816

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.