Evidence map›Paper›PMID 28055970›Full record

ArticleOncotarget2017

Genomic analysis of exceptional responders to radiotherapy reveals somatic mutations in ATM.

Jennifer Ma, Jeremy Setton, Luc Morris, Pedro Blecua Carrillo Albornoz, Christopher Barker, Benjamin H Lok, Eric Sherman, Nora Katabi, Kathryn Beal, Ian Ganly and 4 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 44 citations in OpenAlex.

  1. Trial
  2. Article
  3. Genotype-Directed Synthetic Cytotoxicity of ATR Inhibition with Radiotherapy.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Loss of CDKN2A/B is a Molecular Marker of High-grade Histology and is Associated with Aggressive Behavior in Acinic Cell Carcinoma.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Identifying the Radioresponsive Genome for Genomics-Guided Radiotherapy.Journal of the National Cancer Institute · 2021
    Article
  15. Article
  16. Article
  17. Article
  18. The Implications of Genetic Testing on Radiation Therapy Decisions: A Guide for Radiation Oncologists.International journal of radiation oncology, biology, physics · 2019
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Jennifer MaDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Jeremy SettonDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Luc MorrisDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Pedro Blecua Carrillo AlbornozDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Christopher BarkerDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Benjamin H LokDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Eric ShermanDepartment of Medical Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Nora KatabiDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Kathryn BealDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Ian GanlyDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Simon N PowellDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Nancy LeeDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Timothy A ChanDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Nadeem RiazDepartment of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Memorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
MSK Paul Calabresi Career Development Award for Clinical OncologyK12CA184746 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Omar Abdel-Wahab, Simon N. Powell · 2015 to 2026
$8.3M
Functionalizing recurrent FAT1 mutations and deletions in oral cancerK08DE024774 · NIDCR · SLOAN-KETTERING INST CAN RESEARCH · PI MORRIS, LUC GORDON TRANG · 2014 to 2018
$682k
NCI NIH HHS K12 CA184746NCI NIH HHS P30 CA008748NIDCR NIH HHS K08 DE024774
6 · The paper itself

Abstract

Radiation therapy is a mainstay of cancer treatment, yet the molecular determinants of clinical response are poorly understood. We identified exceptional responders to radiotherapy based on clinical response, and investigated the associated tumor sequencing data in order to identify additional patients with similar mutations. Among head and neck squamous cell cancer patients receiving palliative radiotherapy at our institution, we identified one patient with documented complete metabolic response. Targeted sequencing analysis of the tumor identified a somatic frame-shift mutation in ATM, a gene known to be associated with radio-sensitivity in the germline. To validate the association of somatic ATM mutation with radiotherapy response, we identified eight patients with ATM truncating mutations who received radiotherapy, all of whom demonstrated excellent responses with a median local control period of 4.62 years. Analysis of 22 DNA repair genes in The Cancer Genome Atlas (TCGA) data revealed mutations in 15.9% of 9064 tumors across 24 cancer types, with ATM mutations being the most prevalent. This is the first study to suggest that exceptional responses to radiotherapy may be determined by mutations in DNA repair genes. Sequencing of DNA repair genes merits attention in larger cohorts and may have significant implications for the personalization of radiotherapy.

Indexed as

MutationRadiotherapy DosageAgedAged, 80 and overAtaxia Telangiectasia Mutated ProteinsBiomarkers, TumorCarcinoma, Non-Small-Cell LungCarcinoma, Squamous CellComputational BiologyDatabases, GeneticDNA Mutational AnalysisEndometrial NeoplasmsFemaleHead and Neck NeoplasmsHumansLung NeoplasmsAtaxia Telangiectasia Mutated ProteinsATM protein, humanBiomarkers, Tumorradiation therapysomatic ATM mutations

Identifiers

PMID28055970
PMCPMC5354661
OpenAlexW2560856938

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.