Evidence map›Paper›PMID 28054942›Full record

ArticleInternational journal of molecular sciences2017

A Comprehensive Proteomic Survey of ABA-Induced Protein Phosphorylation in Rice (Oryza sativa L.).

Jiehua Qiu, Yuxuan Hou, Yifeng Wang, Zhiyong Li, Juan Zhao, Xiaohong Tong, Haiyan Lin, Xiangjin Wei, Hejun Ao, Jian Zhang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
7.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

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  15. The Phosphoproteomic Response of Rice Seedlings to Cadmium Stress.International journal of molecular sciences · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jiehua QiuState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. qjh3636@sina.com.
Yuxuan HouState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. houyuxuan@caas.cn.
Yifeng WangState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. wangyifeng@caas.cn.
Zhiyong LiState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. lzhy1418@163.com.
Juan ZhaoState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. zhaojuan521321@163.com.
Xiaohong TongState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. tongxiaohong@caas.cn.
Haiyan LinState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. linhaiyan@188.com.
Xiangjin WeiState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. weixiangjin@caas.cn.
Hejun AoCollege of Agricultural Sciences, Hunan Agricultural University, Changsha 410128, China. aohejun@126.com.
Jian ZhangState Key Lab of Rice Biology, China National Rice Research Institute, Hangzhou 311400, China. zhangjian@caas.cn.
China National Rice Research Institute · CNAgricultural Genomics Institute at Shenzhen · CNHunan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

abscisic acid (ABA) is a key phytohormone regulating plant development and stress response. The signal transduction of ABA largely relies on protein phosphorylation. However; little is known about the phosphorylation events occurring during ABA signaling in rice thus far. By employing a label-free; MS (Mass Spectrometry)-based phosphoproteomic approach; we identified 2271 phosphosites of young rice seedlings and their intensity dynamics in response to ABA; during which 1060 proteins were found to be differentially phosphorylated. Western-blot analysis verified the differential phosphorylation pattern of D1, SMG1 and SAPK9 as indicated by the MS result; suggesting the high reliability of our phosphoproteomic data. The DP (differentially phosphorylated) proteins are extensively involved in ABA as well as other hormone signaling pathways. It is suggested that ABA antagonistically regulates brassinosteroid (BR) signaling via inhibiting BR receptor activity. The result of this study not only expanded our knowledge of rice phosphoproteome, but also shed more light on the pattern of protein phosphorylation in ABA signaling.

Indexed as

Abscisic AcidAmino Acid SequenceOryzaPhosphorylationPlant Growth RegulatorsPlant ProteinsProteomeProteomicsSignal TransductionAbscisic AcidPlant Growth RegulatorsPlant ProteinsProteomeabscisic acidphosphoproteomerice (Oryza sativa L.)signaling

Identifiers

PMID28054942
PMCPMC5297695
OpenAlexW2567444724

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.