Evidence map›Paper›PMID 28054243›Full record

ArticleFish physiology and biochemistry2017

Differential expression and miRNA regulation of the GSTP1 gene in the regenerating liver of Chiloscyllium plagiosum.

Yinghua Ge, Jiewen Zhang, Xinyi Shi, Conger Lu, Lingrong Yang, Yuanyuan Li, Yanna Chen, Dandan Cheng, Jing Bai, Zhengbing Lv and 1 more

Abstract read
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In one paragraph

Article in Fish physiology and biochemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Yinghua GeCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Jiewen ZhangCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Xinyi ShiCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Conger LuCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Lingrong YangCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Yuanyuan LiCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Yanna ChenCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Dandan ChengCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Jing BaiCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Zhengbing LvCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China. zhengbingl@zstu.edu.cn.
Lili LiuCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China. llliu@zstu.edu.cn.
Zhejiang Sci-Tech University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liver regeneration is a complicated process, and understanding the regulatory mechanism will be helpful in the treatment of diseases associated with liver. In this study, the one-third liver resection model was established in Chiloscyllium plagiosum, and the whole transcriptome of the C. plagiosum was generated using the Illumina-Solexa sequencing platform. Differentially expressed genes were analyzed using bioinformatics methods and verified using quantitative real-time PCR (qRT-PCR). Using miRanda and TargetScan, we screened the microRNA library for miRNAs that target the glutathione S-transferase P1(GSTP1) gene. Dual-luciferase reporter assays were used to confirm binding between the miRNA and GSTP1. Finally, we used western blotting analysis to determine expression of the GSTP1 protein. As a result, 65,356 unigenes were obtained in normal and damaged liver tissues, with mean length of 955 bp. A total of 359 differentially expressed genes were acquired; 217 of which were upregulated, and 142 were downregulated, including the GSTP1 gene, following liver resection. The presence of the GSTP1 protein in C. plagiosum was shown for the first time. Luciferase reporter assay revealed that GSTP1 messenger RNA was targeted by ipu-miR-143. The discovery and differential expression analysis of GSTP1 in C. plagiosum will be a valuable resource to explain the molecular mechanism of GSTP1 regulation of liver repair.

Indexed as

3' Untranslated RegionsAnimalsDNAGene Expression Regulation, EnzymologicGlutathione TransferaseLiverLiver RegenerationMicroRNAsReal-Time Polymerase Chain ReactionSharksTranscriptome3' Untranslated RegionsDNAGlutathione TransferaseMicroRNAsChiloscyllium plagiosumGlutathione S-transferase P1Liver regenerationMicroRNATranscriptome

Identifiers

PMID28054243
OpenAlexW2571090210

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.