Evidence map›Paper›PMID 28052253›Full record

ArticleCell reports2017

Proteomic Analysis of Pemphigus Autoantibodies Indicates a Larger, More Diverse, and More Dynamic Repertoire than Determined by B Cell Genetics.

Jing Chen, Qi Zheng, Christoph M Hammers, Christoph T Ellebrecht, Eric M Mukherjee, Hsin-Yao Tang, Chenyan Lin, Huijie Yuan, Meng Pan, Jana Langenhan and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  6. Review
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  8. Pemphigus and Pemphigoid: From Disease Mechanisms to Druggable Pathways.The Journal of investigative dermatology · 2022
    Review
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  13. Mass Spectrometry-BasedJournal of proteome research · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Jing ChenDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Qi ZhengDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Christoph M HammersDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Christoph T EllebrechtDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Eric M MukherjeeDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Hsin-Yao TangProteomics Facility, Wistar Institute, 3601 Spruce Street, Philadelphia, PA 19104, USA.
Chenyan LinDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Huijie YuanDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Meng PanDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Jana LangenhanInstitute of Experimental Immunology, Euroimmun, Seekamp 31, 23560 Lübeck, Germany.
Lars KomorowskiInstitute of Experimental Immunology, Euroimmun, Seekamp 31, 23560 Lübeck, Germany.
Don L SiegelDepartment of Pathology and Laboratory Medicine, 510 Stellar-Chance Laboratories, 422 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
Aimee S PayneDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.
John R StanleyDepartment of Dermatology, 1008 BRB, 421 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address: jrstan@mail.med.upenn.edu.
University of Pennsylvania · USEuroimmun Medizinische Labordiagnostika (Germany) · DEThe Wistar Institute · US

Funding

Penn Dermatology Research Training ProgramT32AR007465 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI Elizabeth Anne Grice, David Joel Margolis · 1986 to 2026
$9.0M
Study Design and Data AnalysisP30AR069589 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI Elizabeth Anne Grice · 2016 to 2026
$8.6M
Cloning and genetics of human pemphigus autoantibodiesR01AR052672 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI STANLEY, JOHN R · 2006 to 2015
$3.7M
Role of autoantibody isotype in pemphigus pathogenesisR01AR057001 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI PAYNE, AIMEE S · 2010 to 2014
$1.7M
Relationships Between Autoimmune IgG1 and IgG4 Repertoires in Pemphigus VulgarisF30AR065870 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI MUKHERJEE, ERIC MILAN · 2014 to 2016
$105k
NIAMS NIH HHS F30 AR065870NIAMS NIH HHS P30 AR069589NIAMS NIH HHS R01 AR052672NIAMS NIH HHS R01 AR057001NIAMS NIH HHS T32 AR007465
6 · The paper itself

Abstract

In autoantibody-mediated diseases such as pemphigus, serum antibodies lead to disease. Genetic analysis of B cells has allowed characterization of antibody repertoires in such diseases but would be complemented by proteomic analysis of serum autoantibodies. Here, we show using proteomic analysis that the serum autoantibody repertoire in pemphigus is much more polyclonal than that found by genetic studies of B cells. In addition, many B cells encode pemphigus autoantibodies that are not secreted into the serum. Heavy chain variable gene usage of serum autoantibodies is not shared among patients, implying targeting of the coded proteins will not be a useful therapeutic strategy. Analysis of autoantibodies in individual patients over several years indicates that many antibody clones persist but the proportion of each changes. These studies indicate a dynamic and diverse autoantibody response not revealed by genetic studies and explain why similar overall autoantibody titers may give variable disease activity.

Indexed as

Amino Acid SequenceAutoantibodiesB-LymphocytesCell Surface Display TechniquesChromatography, LiquidClone CellsComplementarity Determining RegionsDesmogleinsHumansMutationPemphigusProteomicsSingle-Chain AntibodiesTandem Mass SpectrometryAutoantibodiesComplementarity Determining RegionsDesmogleinsSingle-Chain AntibodiesautoantibodiesautoimmunityB cellpemphigusproteomicsserum antibodies

Identifiers

PMID28052253
PMCPMC5221611
OpenAlexW2569631744

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.