Evidence map›Paper›PMID 28051165›Full record

ArticleScientific reports2017

Modification of Monolignol Biosynthetic Pathway in Jute: Different Gene, Different Consequence.

Farhana Shafrin, Ahlan Sabah Ferdous, Suprovath Kumar Sarkar, Rajib Ahmed, Al- Amin, Kawsar Hossain, Mrinmoy Sarker, Jorge Rencoret, Ana Gutiérrez, Jose C Del Rio and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. ACS omega · 2025
    Article
  2. Article
  3. Frontiers in plant science · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Farhana ShafrinMolecular Biology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka-1000, Bangladesh.
Ahlan Sabah FerdousMolecular Biology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka-1000, Bangladesh.
Suprovath Kumar SarkarMolecular Biology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka-1000, Bangladesh.
Rajib AhmedMolecular Biology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka-1000, Bangladesh.
Al- AminMolecular Biology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka-1000, Bangladesh.
Kawsar HossainMolecular Biology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka-1000, Bangladesh.
Mrinmoy SarkerMolecular Biology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka-1000, Bangladesh.
Jorge RencoretDept. Plant Biotechnology IRNAS-CSIC P.O. Box 1052, 41080-Seville, Spain.
Ana GutiérrezDept. Plant Biotechnology IRNAS-CSIC P.O. Box 1052, 41080-Seville, Spain.
Jose C Del RioDept. Plant Biotechnology IRNAS-CSIC P.O. Box 1052, 41080-Seville, Spain.
Neeti Sanan-MishraPlant RNAi Biology Group, International Center for Genetic Engineering and Biotechnology (ICGEB), New Delhi-11006, India.
Haseena KhanMolecular Biology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka-1000, Bangladesh.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lignin, a cross-linked macromolecule of hydrophobic aromatic structure, provides additional rigidity to a plant cell wall. Although it is an integral part of the plant cell, presence of lignin considerably reduces the quality of the fiber of fiber-yielding plants. Decreasing lignin in such plants holds significant commercial and environmental potential. This study aimed at reducing the lignin content in jute-a fiber crop, by introducing hpRNA-based vectors for downregulation of two monolignoid biosynthetic genes- cinnamate 4-hydroxylase (C4H) and caffeic acid O-methyltransferase (COMT). Transgenic generations, analyzed through Southern, RT-PCR and northern assays showed downregulation of the selected genes. Transgenic lines exhibited reduced level of gene expression with ~ 16-25% reduction in acid insoluble lignin for the whole stem and ~13-14% reduction in fiber lignin content compared to the control lines. Among the two transgenic plant types one exhibited an increase in cellulose content and concomitant improvement of glucose release. Composition of the lignin building blocks was found to alter and this alteration resulted in a pattern, different from other plants where the same genes were manipulated. It is expected that successful COMT-hpRNA and C4H-hpRNA transgenesis in jute will have far-reaching commercial implications leading to product diversification and value addition.

Indexed as

CorchorusGene Expression Regulation, PlantLigninMethyltransferasesPlants, Genetically ModifiedTrans-Cinnamate 4-Monooxygenasecaffeate O-methyltransferaseLigninMethyltransferasesTrans-Cinnamate 4-Monooxygenase

Identifiers

PMID28051165
PMCPMC5209690

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.