Evidence map›Paper›PMID 28051123›Full record

ArticleScientific reports2017

Model fit versus biological relevance: Evaluating photosynthesis-temperature models for three tropical seagrass species.

Matthew P Adams, Catherine J Collier, Sven Uthicke, Yan X Ow, Lucas Langlois, Katherine R O'Brien

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Cool-edge populations of the kelpProceedings. Biological sciences · 2024
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  6. Article
  7. Article
  8. Modeling total predation to avoid perverse outcomes from cat control in a data-poor island ecosystem.Conservation biology : the journal of the Society for Conservation Biology · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Thermal performance across levels of biological organization.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Matthew P AdamsSchool of Chemical Engineering, The University of Queensland, St Lucia, 4072, Australia.
Catherine J CollierCollege of Marine and Environmental Science, James Cook University, Townsville, 4811, Australia.
Sven UthickeAustralian Institute of Marine Science, PMB No. 3, Townsville, 4811, Australia.
Yan X OwCollege of Marine and Environmental Science, James Cook University, Townsville, 4811, Australia.
Lucas LangloisCentre for Tropical Water &Aquatic Ecosystem Research (TropWATER), James Cook University, Cairns, 4870, Australia.
Katherine R O'BrienSchool of Chemical Engineering, The University of Queensland, St Lucia, 4072, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

When several models can describe a biological process, the equation that best fits the data is typically considered the best. However, models are most useful when they also possess biologically-meaningful parameters. In particular, model parameters should be stable, physically interpretable, and transferable to other contexts, e.g. for direct indication of system state, or usage in other model types. As an example of implementing these recommended requirements for model parameters, we evaluated twelve published empirical models for temperature-dependent tropical seagrass photosynthesis, based on two criteria: (1) goodness of fit, and (2) how easily biologically-meaningful parameters can be obtained. All models were formulated in terms of parameters characterising the thermal optimum (T

Indexed as

Models, BiologicalPhotosynthesisTemperatureAlismatalesData Interpretation, StatisticalReproducibility of ResultsTropical Climate

Identifiers

PMID28051123
PMCPMC5209739

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.