Evidence map›Paper›PMID 28050553›Full record

ArticleBioMed research international2016

Previously Unidentified Single Nucleotide Polymorphisms in HIV/AIDS Cases Associate with Clinical Parameters and Disease Progression.

Vladimir V Anokhin, Liliia B Bakhteeva, Gulshat R Khasanova, Svetlana F Khaiboullina, Ekaterina V Martynova, Richard L Tillett, Karen A Schlauch, Vincent C Lombardi, Albert A Rizvanov

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 2 pooled it
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 2 syntheses or guidelines pooled it, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Vladimir V AnokhinKazan State Medical University, 49 Butlerova St., Kazan 420012, Russia; Republican Clinical Hospital for Infectious Disease named after Agafonov, 83 Prospect Pobedy St, Kazan 420140, Russia.ORCID 0000-0003-1050-9081
Liliia B BakhteevaRepublican Center for the Prevention and Fighting of AIDS and Infectious Diseases, Ministry of Health of the Republic of Tatarstan, 2a Vishevskogo St., Kazan 420097, Russia.
Gulshat R KhasanovaKazan State Medical University, 49 Butlerova St., Kazan 420012, Russia; Republican Clinical Hospital for Infectious Disease named after Agafonov, 83 Prospect Pobedy St, Kazan 420140, Russia.
Svetlana F KhaiboullinaKazan Federal University, 18 Kremlyovskaya St., Kazan 420008, Russia; Department of Biochemistry, University of Nevada, Reno, 1664 N. Virginia Street MS 0330, Reno, NV 89557, USA.ORCID 0000-0002-5064-570X
Ekaterina V MartynovaKazan Federal University, 18 Kremlyovskaya St., Kazan 420008, Russia.ORCID 0000-0003-1537-3099
Richard L TillettNevada Center for Biomedical Research, University of Nevada, Reno, 1664 N. Virginia Street MS 0552, Reno, NV 89557, USA.
Karen A SchlauchNevada Center for Biomedical Research, University of Nevada, Reno, 1664 N. Virginia Street MS 0552, Reno, NV 89557, USA.
Vincent C LombardiKazan Federal University, 18 Kremlyovskaya St., Kazan 420008, Russia; Nevada Center for Biomedical Research, University of Nevada, Reno, 1664 N. Virginia Street MS 0552, Reno, NV 89557, USA.ORCID 0000-0003-4474-8662
Albert A RizvanovKazan Federal University, 18 Kremlyovskaya St., Kazan 420008, Russia.ORCID 0000-0002-9427-5739
University of Nevada, Reno · USKazan Federal University · RUKazan State Medical University · RURepublican Center for the Prevention and Control of AIDS and Infectious Diseases · RU

Funding

Outreach/Diversity/Pipeline ProjectP20GM103440 · NIGMS · UNIVERSITY OF NEVADA RENO · PI Eduardo A Robleto · 2012 to 2026
$58.0M
New Strategies to Decipher the Pathophysiology of Chronic Fatigue SyndromeR01AI078234 · NIAID · NEVADA CENTER FOR BIOMEDICAL RESEARCH · PI LOMBARDI, VINCENT C · 2009 to 2013
$1.5M
NIAID NIH HHS R01 AI078234NIGMS NIH HHS P20 GM103440
6 · The paper itself

Abstract

The genetic background of an individual plays an important role in the progression of HIV infection to AIDS. Identifying previously unknown or uncharacterized single nucleotide polymorphisms (SNPs) that associate with disease progression may reveal important therapeutic targets and provide a greater understanding of disease pathogenesis. In the present study, we employed ultra-high multiplex PCR on an Ion Torrent next-generation sequencing platform to sequence 23 innate immune genes from 94 individuals with HIV/AIDS. This data was used to identify potential associations of SNPs with clinical parameters and disease progression. SNPs that associated with an increased viral load were identified in the genes for the interleukin 15 receptor (

Indexed as

Disease ProgressionGenetic Predisposition to DiseaseAcquired Immunodeficiency SyndromeAdultFemaleHumansMaleMiddle AgedPolymorphism, Single NucleotideSequence Analysis, DNAViral LoadYoung Adult

Identifiers

PMID28050553
PMCPMC5165134
OpenAlexW2559987954

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.