Evidence map›Paper›PMID 28049830›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Characterization of cytopathic factors through genome-wide analysis of the Zika viral proteins in fission yeast.

Ge Li, Melissa Poulsen, Csaba Fenyvuesvolgyi, Yoko Yashiroda, Minoru Yoshida, J Marc Simard, Robert C Gallo, Richard Y Zhao

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 64 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. An overview of Zika virus genotypes and their infectivity.Revista da Sociedade Brasileira de Medicina Tropical · 2022
    Review
  11. Review
  12. Article
  13. Review
  14. Contribution of yeast models to virus research.Applied microbiology and biotechnology · 2021
    Review
  15. Article
  16. Article
  17. Viruses · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Ge LiDepartment of Pathology, University of Maryland School of Medicine, Baltimore, MD 21201.
Melissa PoulsenDepartment of Pathology, University of Maryland School of Medicine, Baltimore, MD 21201.
Csaba FenyvuesvolgyiDepartment of Pathology, University of Maryland School of Medicine, Baltimore, MD 21201.
Yoko YashirodaRIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan.
Minoru YoshidaRIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan.
J Marc SimardDepartment of Pathology, University of Maryland School of Medicine, Baltimore, MD 21201.
Robert C GalloDepartment of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD 21201; RZhao@som.umaryland.edu rgallo@ihv.umaryland.edu.
Richard Y ZhaoDepartment of Pathology, University of Maryland School of Medicine, Baltimore, MD 21201; RZhao@som.umaryland.edu rgallo@ihv.umaryland.edu.
University of Maryland, Baltimore · USRIKEN Center for Sustainable Resource Science · JP

Funding

Rapid Phenotyping of the ZIKV GenomeR21AI129369 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI ZHAO, RICHARD YUQI · 2017 to 2018
$425k
NIAID NIH HHS R21 AI129369
6 · The paper itself

Abstract

The Zika virus (ZIKV) causes microcephaly and the Guillain-Barré syndrome. Little is known about how ZIKV causes these conditions or which ZIKV viral protein(s) is responsible for the associated ZIKV-induced cytopathic effects, including cell hypertrophy, growth restriction, cell-cycle dysregulation, and cell death. We used fission yeast for the rapid, global functional analysis of the ZIKV genome. All 14 proteins or small peptides were produced under an inducible promoter, and we measured the intracellular localization and the specific effects on ZIKV-associated cytopathic activities of each protein. The subcellular localization of each ZIKV protein was in overall agreement with its predicted protein structure. Five structural and two nonstructural ZIKV proteins showed various levels of cytopathic effects. The expression of these ZIKV proteins restricted cell proliferation, induced hypertrophy, or triggered cellular oxidative stress leading to cell death. The expression of premembrane protein (prM) resulted in cell-cycle G1 accumulation, whereas membrane-anchored capsid (anaC), membrane protein (M), envelope protein (E), and nonstructural protein 4A (NS4A) caused cell-cycle G2/M accumulation. A mechanistic study revealed that NS4A-induced cellular hypertrophy and growth restriction were mediated specifically through the target of rapamycin (TOR) cellular stress pathway involving Tor1 and type 2A phosphatase activator Tip41. These findings should provide a reference for future research on the prevention and treatment of ZIKV diseases.

Indexed as

Cell CycleCell DeathCell ProliferationGenome, ViralGenome-Wide Association StudyHypertrophyMembrane ProteinsOxidative StressPromoter Regions, GeneticSchizosaccharomycesViral Nonstructural ProteinsZika VirusZika Virus InfectionMembrane ProteinsViral Nonstructural Proteinscytopathic factorsfission yeastSchizosaccharomyces pombeZika genomeZika proteins

Identifiers

PMID28049830
PMCPMC5255628
OpenAlexW2563604877

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.