Evidence map›Paper›PMID 28049530›Full record

ArticleMicrobial cell factories2017

Metabolic engineering of indole pyruvic acid biosynthesis in Escherichia coli with tdiD.

Yelin Zhu, Yan Hua, Biao Zhang, Lianhong Sun, Wenjie Li, Xin Kong, Jiong Hong

Abstract read
In one paragraph

Article in Microbial cell factories, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yelin ZhuSchool of Life Sciences, University of Science and Technology of China, Hefei, Anhui, 230027, People's Republic of China.
Yan HuaSchool of Life Sciences, University of Science and Technology of China, Hefei, Anhui, 230027, People's Republic of China.
Biao ZhangSchool of Life Sciences, University of Science and Technology of China, Hefei, Anhui, 230027, People's Republic of China.
Lianhong SunSchool of Life Sciences, University of Science and Technology of China, Hefei, Anhui, 230027, People's Republic of China.
Wenjie LiSchool of Life Sciences, University of Science and Technology of China, Hefei, Anhui, 230027, People's Republic of China.
Xin KongSchool of Life Sciences, University of Science and Technology of China, Hefei, Anhui, 230027, People's Republic of China.
Jiong HongSchool of Life Sciences, University of Science and Technology of China, Hefei, Anhui, 230027, People's Republic of China. hjiong@ustc.edu.cn.ORCID http://orcid.org/0000-0002-4592-7083

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIndole pyruvic acid (IPA) is a versatile platform intermediate and building block for a number of high-value products in the pharmaceutical and food industries. It also has a wide range of applications, such as drugs for the nervous system, cosmetics, and luminophores. Chemical synthesis of IPA is a complicated and costly process. Moreover, through the biosynthesis route employing L-amino acid oxidase, the byproduct hydrogen peroxide leads the degradation of IPA. TdiD, identified as a specific tryptophan aminotransferase, could be an alternative solution for efficient IPA biosynthesis.

resultsEscherichia coli strain W3110, which demonstrates basic production when supplied with tryptophan, was engineered for IPA biosynthesis. Several strategies were implemented to improve IPA production. First, through incorporating the codon-optimized tdiD into W3110, IPA levels increased from 41.54 ± 1.26 to 52.54 ± 2.08 mg/L. Second, after verifying the benefit of an increased phenylpyruvate pool, a YL03 strain was constructed based on a previously reported mutant strain of W3110 with a plasmid carrying aroF

conclusionsThis study illustrates the feasibility of IPA biosynthesis in E. coli through tdiD. An efficient IPA producing strain, YL08, was developed, which provides a new possibility for biosynthesis of IPA. Although the final production was limited, this study demonstrates a convenient method of IPA synthesis.

Indexed as

Escherichia coliEscherichia coli ProteinsIndolesMetabolic EngineeringTryptophan TransaminaseEscherichia coli Proteinsindol-3-yl pyruvic acidIndolesTryptophan TransaminaseAminotransferaseIndole pyruvic acidtdiDtnaA

Identifiers

PMID28049530
PMCPMC5209907

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.