Evidence map›Paper›PMID 28045247›Full record

ArticleACS chemical neuroscience2017

Directed Evolution of Key Residues in Fluorescent Protein Inverses the Polarity of Voltage Sensitivity in the Genetically Encoded Indicator ArcLight.

Jelena Platisa, Ganesh Vasan, Amy Yang, Vincent A Pieribone

Abstract read
In one paragraph

Article in ACS chemical neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jelena PlatisaThe John B. Pierce Laboratory, Inc. , New Haven, Connecticut 06519, United States.ORCID 0000-0003-4813-609X
Ganesh VasanThe John B. Pierce Laboratory, Inc. , New Haven, Connecticut 06519, United States.
Amy YangThe John B. Pierce Laboratory, Inc. , New Haven, Connecticut 06519, United States.
Vincent A PieriboneThe John B. Pierce Laboratory, Inc. , New Haven, Connecticut 06519, United States.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
High Throughput of Protein-based Voltage ProbesU01NS103517 · NINDS · JOHN B. PIERCE LABORATORY, INC. · PI PIERIBONE, VINCENT A · 2017 to 2019
$2.4M
Genetically-Encoded Voltage Probe DevelopmentR01NS083875 · NINDS · JOHN B. PIERCE LABORATORY, INC. · PI HUGHES, THOMAS E, NITABACH, MICHAEL · 2013 to 2016
$2.3M
Development of Protein-based Voltage ProbesU01NS090565 · NINDS · JOHN B. PIERCE LABORATORY, INC. · PI PIERIBONE, VINCENT A · 2014 to 2016
$1.7M
NCATS NIH HHS UL1 TR001863NINDS NIH HHS R01 NS083875NINDS NIH HHS U01 NS090565NINDS NIH HHS U01 NS103517
6 · The paper itself

Abstract

Genetically encoded calcium indicators (GECIs) produce unprecedentedly large signals that have enabled routine optical recording of single neuron activity in vivo in rodent brain. Genetically encoded voltage indicators (GEVIs) offer a more direct measure of neuronal electrical status, however the signal-to-noise characteristics and signal polarity of the probes developed to date have precluded routine use in vivo. We applied directed evolution to target modulable areas of the fluorescent protein in GEVI ArcLight to create the first GFP-based GEVI (Marina) that exhibits a ΔF/ΔV with a positive slope relationship. We found that only three rounds of site-directed mutagenesis produced a family of "brightening" GEVIs with voltage sensitivities comparable to that seen in the parent probe ArcLight. This shift in signal polarity is an essential first step to producing voltage indicators with signal-to-noise characteristics comparable to GECIs to support widespread use in vivo.

Indexed as

AnimalsCells, CulturedCerebral CortexElectric StimulationEmbryo, MammalianGreen Fluorescent ProteinsHEK293 CellsHumansLuminescent ProteinsMiceModels, MolecularMolecular BiologyMutagenesis, Site-DirectedMutationNeuronsPatch-Clamp TechniquesArclight fusion proteinGreen Fluorescent ProteinsLuminescent ProteinsRecombinant Fusion ProteinsArcLightbiosensorsdirected evolutionGenetically encoded voltage indicatorsgreen fluorescent proteinmutagenesis

Identifiers

PMID28045247
PMCPMC5355904

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.