Evidence map›Paper›PMID 28044275›Full record

ArticleWorld journal of microbiology & biotechnology2017

Improvement of shikimic acid production in Escherichia coli with growth phase-dependent regulation in the biosynthetic pathway from glycerol.

Ming-Yi Lee, Wen-Pin Hung, Shu-Hsien Tsai

Abstract read
PubMed Publisher
In one paragraph

Article in World journal of microbiology & biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. EngineeringSynthetic and systems biotechnology · 2020
    Article
  8. Review
  9. Article
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ming-Yi LeeDepartment of Nutrition and Health Sciences, Research Center for Food and Cosmetic Safety, and Research Center for Chinese Herbal Medicine, College of Human Ecology, Chang Gung University of Science and Technology, Kweishan, Taoyuan, Taiwan.
Wen-Pin HungMaterial and Chemical Research Laboratories, Industrial Technology Research Institute, Hsinchu, Taiwan.
Shu-Hsien TsaiMaterial and Chemical Research Laboratories, Industrial Technology Research Institute, Hsinchu, Taiwan. d92b47401@ntu.edu.tw.
Industrial Technology Research Institute · TWChang Gung University of Science and Technology · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shikimic acid is an important metabolic intermediate with various applications. This paper presents a novel control strategy for the construction of shikimic acid producing strains, without completely blocking the aromatic amino acid biosynthesis pathways. Growth phase-dependent expression and gene deletion was performed to regulate the aroK gene expression in the shikimic acid producing Escherichia coli strain, SK4/rpsM. In this strain, the aroL and aroK genes were deleted, and the aroB, aroG*, ppsA, and tktA genes were overexpressed. The relative amount of shikimic acid that accumulated in SK4/rpsM was 1.28-fold higher than that in SK4/pLac. Furthermore, a novel shikimic acid production pathway, combining the expression of the dehydroquinate dehydratase-shikimate dehydrogenase (DHQ-SDH) enzyme from woody plants, was constructed in E. coli strains. The results demonstrated that a growth phase-dependent control of the aroK gene leads to higher SA accumulation (5.33 g/L) in SK5/pSK6. This novel design can achieve higher shikimic acid production by using the same amount of medium used by the current methods and can also be widely used for modifying other metabolic pathways.

Indexed as

Alcohol OxidoreductasesBiosynthetic PathwaysEscherichia coliEscherichia coli ProteinsGene DeletionGene Expression Regulation, BacterialGlycerolKineticsMetabolic EngineeringPhosphotransferases (Alcohol Group Acceptor)Plant ProteinsPyruvate SynthaseShikimic AcidAlcohol OxidoreductasesEscherichia coli ProteinsGlycerolPhosphotransferases (Alcohol Group Acceptor)Plant ProteinsppsA protein, E coliPyruvate Synthaseshikimate kinaseShikimic AcidAroK geneBiosynthetic pathwayEscherichia coliMetabolic engineeringShikimic acid

Identifiers

PMID28044275
OpenAlexW2567602713

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.