Evidence map›Paper›PMID 28040895›Full record

ArticleJournal of the American Chemical Society2017

Biosynthesis of Branched Alkoxy Groups: Iterative Methyl Group Alkylation by a Cobalamin-Dependent Radical SAM Enzyme.

Yuanyou Wang, Bastien Schnell, Sascha Baumann, Rolf Müller, Tadhg P Begley

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 68 citations in OpenAlex.

  1. Review
  2. Review
  3. Structural basis for iterative methylation by a cobalamin-dependent radicalProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. ThnL, a B12-dependent radicalProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. A Cobalamin-Dependent Radical SAM Enzyme Catalyzes the Unique CAngewandte Chemie (International ed. in English) · 2022
    Article
  10. Article
  11. Biosynthesis of 3-thia-α-amino acids on a carrier peptide.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Cobalamin-Dependent RadicalACS bio & med chem Au · 2022
    Review
  13. The Atypical Cobalamin-DependentJournal of the American Chemical Society · 2022
    Article
  14. Article
  15. Article
  16. Structure of a BNature · 2022
    Article
  17. Article
  18. Studies of GenK and OxsB, two BMethods in enzymology · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Yuanyou WangDepartment of Chemistry, Texas A&M University , College Station, Texas 77843, United States.ORCID 0000-0002-9774-7877
Bastien SchnellDepartment of Microbial Natural Products, Helmholtz Institute for Pharmaceutical Research Saarland, Helmholtz Center for Infection Research, Saarland University , Universitätscampus E8.1, D-66123 Saarbrücken, Germany.
Sascha BaumannDepartment of Microbial Natural Products, Helmholtz Institute for Pharmaceutical Research Saarland, Helmholtz Center for Infection Research, Saarland University , Universitätscampus E8.1, D-66123 Saarbrücken, Germany.
Rolf MüllerDepartment of Microbial Natural Products, Helmholtz Institute for Pharmaceutical Research Saarland, Helmholtz Center for Infection Research, Saarland University , Universitätscampus E8.1, D-66123 Saarbrücken, Germany.
Tadhg P BegleyDepartment of Chemistry, Texas A&M University , College Station, Texas 77843, United States.
Helmholtz Institute for Pharmaceutical Research Saarland · DETexas A&M University · US

Funding

The mechanistic enzymology of thiamin biosynthesisR37DK044083 · NIDDK · TEXAS A&M UNIVERSITY · PI BEGLEY, TADHG P. · 2008 to 2017
$3.7M
The mechanistic enzymology of thiamin biosynthesisR01DK044083 · NIDDK · CORNELL UNIVERSITY ITHACA · PI BEGLEY, TADHG P. · 1991 to 2007
$2.5M
The mechanistic enzymology of thiamin biosynthesisR56DK044083 · NIDDK · TEXAS A&M UNIVERSITY · PI BEGLEY, TADHG P. · 2019 to 2019
$150k
NIDDK NIH HHS R01 DK044083NIDDK NIH HHS R37 DK044083NIDDK NIH HHS R56 DK044083
6 · The paper itself

Abstract

The biosynthesis of branched alkoxy groups, such as the unique t-butyl group found in a variety of natural products, is still poorly understood. Recently, cystobactamids were isolated and identified from Cystobacter sp as novel antibacterials. These metabolites contain an isopropyl group proposed to be formed using CysS, a cobalamin-dependent radical S-adenosylmethionine (SAM) methyltransferase. Here, we reconstitute the CysS-catalyzed reaction, on p-aminobenzoate thioester substrates, and demonstrate that it not only catalyzes sequential methylations of a methyl group to form ethyl and isopropyl groups but remarkably also sec-butyl and t-butyl groups. To our knowledge, this is the first in vitro reconstitution of a cobalamin-dependent radical SAM enzyme catalyzing the conversion of a methyl group to a t-butyl group.

Indexed as

AlkylationAnti-Bacterial AgentsAsparagineBiocatalysisFree RadicalsMethyl EthersMethyltransferasesMolecular StructureNitro CompoundsS-AdenosylmethionineVitamin B 12Anti-Bacterial AgentsAsparaginecystobactamid 919-2Free RadicalsMethyl EthersMethyltransferasesNitro CompoundsS-AdenosylmethionineVitamin B 12

Identifiers

PMID28040895
PMCPMC6078419
OpenAlexW2564928567

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.