Evidence map›Paper›PMID 28039515›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2017

Genome-wide association mapping for seedling and field resistance to Puccinia striiformis f. sp. tritici in elite durum wheat.

Weizhen Liu, Marco Maccaferri, Peter Bulli, Sheri Rynearson, Roberto Tuberosa, Xianming Chen, Michael Pumphrey

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
12.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Article
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  4. Mapping QTLs for adult-plant resistance to yellow rust in a hard winter wheat population Heyne × Lakin.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  10. Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Weizhen LiuDepartment of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164-6420, USA. weizhen.liu@wsu.edu.ORCID http://orcid.org/0000-0002-0780-0284
Marco MaccaferriDepartment of Agricultural Sciences, University of Bologna, 40127, Bologna, Italy.
Peter BulliDepartment of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164-6420, USA.
Sheri RynearsonDepartment of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164-6420, USA.
Roberto TuberosaDepartment of Agricultural Sciences, University of Bologna, 40127, Bologna, Italy.
Xianming ChenWheat Health, Genetics, and Quality Research Unit, USDA-ARS, Pullman, WA, 99164-6430, USA.
Michael PumphreyDepartment of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164-6420, USA. m.pumphrey@wsu.edu.
Washington State University · USUniversity of Bologna · ITQuality Research · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageGenome-wide association analysis in tetraploid wheat revealed novel and diverse loci for seedling and field resistance to stripe rust in elite spring durum wheat accessions from worldwide. Improving resistance to stripe rust, caused by Puccinia striiformis f. sp. tritici, is a major objective for wheat breeding. To identify effective stripe rust resistance loci, a genome-wide association study (GWAS) was conducted using 232 elite durum wheat (Triticum turgidum ssp. durum) lines from worldwide breeding programs. Genotyping with the 90 K iSelect wheat single nucleotide polymorphism (SNP) array resulted in 11,635 markers distributed across the genome. Response to stripe rust infection at the seedling stage revealed resistant and susceptible accessions present in rather balanced frequencies for the six tested races, with a higher frequency of susceptible responses to United States races as compared to Italian races (61.1 vs. 43.1% of susceptible accessions). Resistance at the seedling stage only partially explained adult plant resistance, which was found to be more frequent with 67.7% of accessions resistant across six nurseries in the United States. GWAS identified 82 loci associated with seedling stripe rust resistance, five of which were significant at the false discovery rate adjusted P value <0.1 and 11 loci were detected for the field response at the adult plant stages in at least two environments. Notably, Yrdurum-1BS.1 showed the largest effect for both seedling and field resistance, and is therefore considered as a major locus for resistance in tetraploid wheat. Our GWAS study is the first of its kind for stripe rust resistance in tetraploid wheat and provides an overview of resistance in elite germplasm and reports new loci that can be used in breeding resistant cultivars.

Indexed as

BasidiomycotaQuantitative Trait LociBayes TheoremChromosome MappingCluster AnalysisDisease ResistanceDNA, PlantGenetic Association StudiesGenetic MarkersGenotypeLinkage DisequilibriumPhenotypePlant BreedingPlant DiseasesPolymorphism, Single NucleotideSeedlingsDNA, PlantGenetic Markers

Identifiers

PMID28039515
OpenAlexW2567357413

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.