Evidence map›Paper›PMID 28039450›Full record

ArticleOncotarget2017

Aberrant promoter methylation of hOGG1 may be associated with increased risk of non-small cell lung cancer.

Hualong Qin, Jianjie Zhu, Yuanyuan Zeng, Wenwen Du, Dan Shen, Zhe Lei, Qian Qian, Jian-An Huang, Zeyi Liu

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. [Progress of Epigenetic Methylation in Lung Cancer Research].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Hualong QinDepartment of Cardiothoracic Surgery, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.
Jianjie ZhuDepartment of Respiratory Medicine, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.
Yuanyuan ZengDepartment of Respiratory Medicine, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.
Wenwen DuDepartment of Respiratory Medicine, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.
Dan ShenDepartment of Respiratory Medicine, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.
Zhe LeiLaboratory of Cancer Molecular Genetics, Medical College of Soochow University, Suzhou 215123, China.
Qian QianDivision of Allergy & Immunology, Department of Medicine, National Jewish Health, Denver, CO 80206, USA.
Jian-An HuangDepartment of Respiratory Medicine, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.
Zeyi LiuDepartment of Respiratory Medicine, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.
Soochow University · CNFirst Affiliated Hospital of Soochow University · CNUniversity of Colorado Denver · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation may epigenetically inactivate tumor suppressor genes in NSCLC. As the human 8-oxoguanine DNA glycosylase (hOGG1) gene promoter is frequently methylated in NSCLC, we evaluated whether genetic or epigenetic alterations of hOGG1 are associated with increased risk of non-small cell lung cancer. Three hOGG1 haplotype-tagging SNPs (htSNP) were genotyped in PCR-restriction fragment length polymorphism assays, and one htSNP was genotyped in a PCR-single-strand conformation polymorphism assay in case-control studies of 217 NSCLC patients and 226 healthy controls. The methylation profiles of peripheral blood mononuclear cell specimens from 121 NSCLC patients and 121 controls were determined through methylation-specific PCR of hOGG1. No differences in allele or genotype frequencies between NSCLC patients and controls were observed at any of the four polymorphic sites (rs159153, rs125701, rs1052133, and rs293795). However, hOGG1 methylation-positive carriers had a 2.25-fold greater risk of developing NSCLC (adjusted odds ratio: 2.247; 95% confidence interval: 1.067-4.734; P = 0.03) than methylation-free subjects. Furthermore, the demethylating agent 5-aza-2'-deoxycytidine restored hOGG1 expression in NSCLC cell lines. These data provide strong evidence of an association between peripheral blood mononuclear cell hOGG1 methylation and the risk of NSCLC in a Chinese population.

Indexed as

DNA MethylationPromoter Regions, GeneticA549 CellsAgedAsian PeopleAzacitidineBiomarkers, TumorCarcinoma, Non-Small-Cell LungCase-Control StudiesChinaChi-Square DistributionDecitabineDNA GlycosylasesDNA Modification MethylasesEnzyme InhibitorsFemaleAzacitidineBiomarkers, TumorDecitabineDNA GlycosylasesDNA Modification MethylasesEnzyme Inhibitorsoxoguanine glycosylase 1, humanbase excision repairhOGG1methylationnon-small cell lung cancerSNP

Identifiers

PMID28039450
PMCPMC5352404
OpenAlexW2561097366

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.