Evidence map›Paper›PMID 28035578›Full record

ArticleMedical oncology (Northwood, London, England)2017

The BAX gene as a candidate for negative autophagy-related genes regulator on mRNA levels in colorectal cancer.

Justyna Gil, David Ramsey, Elzbieta Szmida, Przemyslaw Leszczynski, Pawel Pawlowski, Marek Bebenek, Maria M Sasiadek

Open access · hybridAbstract read
In one paragraph

Article in Medical oncology (Northwood, London, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  8. Review
  9. Article
  10. A Novel Risk Model Based on Autophagy Pathway Related Genes for Survival Prediction in Lung Adenocarcinoma.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Article
  11. Article
  12. Caffeine and its main targets of colorectal cancer.World journal of gastrointestinal oncology · 2020
    Review
  13. Article
  14. Leucine-Rich Alpha-2-Glycoprotein1 Gene Interferes with Regulation of Apoptosis in Leukemia KASUMI-1 Cells.Medical science monitor : international medical journal of experimental and clinical research · 2018
    Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Justyna GilDepartment of Genetics, Wroclaw Medical University, 50-368, Wroclaw, Poland. justyna.gil@umed.wroc.pl.
David RamseyDepartment of Operations Research, Wroclaw University of Technology, 50-372, Wroclaw, Poland.
Elzbieta SzmidaDepartment of Genetics, Wroclaw Medical University, 50-368, Wroclaw, Poland.
Przemyslaw LeszczynskiDepartment of Biology and Medical Parasitology, Wroclaw Medical University, 50-345, Wroclaw, Poland.
Pawel PawlowskiDepartment of Genetics, Wroclaw Medical University, 50-368, Wroclaw, Poland.
Marek BebenekFirst Department of Surgical Oncology, Lower Silesian Oncology Center, 53-413, Wroclaw, Poland.
Maria M SasiadekDepartment of Genetics, Wroclaw Medical University, 50-368, Wroclaw, Poland.
Wroclaw Medical University · PLLublin Oncology Center · PLWrocław University of Science and Technology · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is a catabolic process, which is involved in the maintenance of intracellular homeostasis by degrading redundant molecules and organelles. Autophagy begins with the formation of a double-membrane phagophore, followed by its enclosure, thus leading to the appearance of an autophagosome which fuses with lysosome. This process is highly conserved, precisely orchestrated and regulated by autophagy-related genes. Recently, autophagy has been widely studied in different types of cancers, including colorectal cancer. As it has been revealed, autophagy plays two opposite roles in tumorigenesis, as a tumor suppressor and a tumor enhancer/activator, and therefore is called a double-edge sword. Recently, interaction between autophagy and apoptosis has been found. Therefore, we aimed to study the mRNA levels of genes engaged in autophagy and apoptosis in colorectal cancer tissues. Colorectal cancer and adjacent healthy tissues were obtained from 73 patients diagnosed with primary colorectal cancer. Real-time PCR analysis employing Universal Probe Library was used to assess the expression of the seven following selected genes: BECN1, UVRAG, ULK1, ATG13, Bif-1, BCL2 and BAX. For all but one of the tested genes, a decrease in expression was observed. An increase in expression was observed for BAX. BAX expression decreases consistently from early to more advanced stages. High expression of BAX was strongly associated with negative UVRAG expression. The high expression of the BAX gene seems to be a negative regulator of autophagy in colorectal cancer cells. The relative downregulation of autophagy-related genes was observed in colorectal cancer samples.

Indexed as

Gene Expression Regulation, NeoplasticAdultAgedAged, 80 and overAge FactorsAutophagybcl-2-Associated X ProteinColorectal NeoplasmsFemaleHumansMaleMiddle AgedNeoplasm StagingRNA, MessengerSex FactorsBAX protein, humanbcl-2-Associated X ProteinRNA, MessengerApoptosisAutophagyColorectal cancerRelative expression

Identifiers

PMID28035578
PMCPMC5199770
OpenAlexW2563562768

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.