Evidence map›Paper›PMID 28033708›Full record

ArticleACS synthetic biology2017

A Simple Combinatorial Codon Mutagenesis Method for Targeted Protein Engineering.

Ketaki D Belsare, Mary C Andorfer, Frida S Cardenas, Julia R Chael, Hyun June Park, Jared C Lewis

Abstract read
In one paragraph

Article in ACS synthetic biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Assembly and Evolution of Artificial Metalloenzymes withinJournal of the American Chemical Society · 2022
    Article
  8. Article
  9. Directed Evolution Methods for Enzyme Engineering.Molecules (Basel, Switzerland) · 2021
    Review
  10. Article
  11. Multicomponent Bioluminescence Imaging with a π-Extended Luciferin.Journal of the American Chemical Society · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Aromatic Halogenation by Using Bifunctional Flavin Reductase-Halogenase Fusion Enzymes.Chembiochem : a European journal of chemical biology · 2017
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ketaki D BelsareDepartment of Chemistry, University of Chicago , Chicago, Illinois 60637, United States.
Mary C AndorferDepartment of Chemistry, University of Chicago , Chicago, Illinois 60637, United States.
Frida S CardenasDepartment of Chemistry, University of Chicago , Chicago, Illinois 60637, United States.
Julia R ChaelDepartment of Chemistry, University of Chicago , Chicago, Illinois 60637, United States.
Hyun June ParkDepartment of Chemistry, University of Chicago , Chicago, Illinois 60637, United States.
Jared C LewisDepartment of Chemistry, University of Chicago , Chicago, Illinois 60637, United States.ORCID 0000-0003-2800-8330
University of Chicago · US

Funding

Directed Evolution of Halogenases For Small Molecule FunctionalizationR01GM115665 · NIGMS · UNIVERSITY OF CHICAGO · PI LEWIS, JARED C · 2015 to 2022
$2.5M
NIGMS NIH HHS R01 GM115665
6 · The paper itself

Abstract

Directed evolution is a powerful tool for optimizing enzymes, and mutagenesis methods that improve enzyme library quality can significantly expedite the evolution process. Here, we report a simple method for targeted combinatorial codon mutagenesis (CCM). To demonstrate the utility of this method for protein engineering, CCM libraries were constructed for cytochrome P450

Indexed as

CodonCytochrome P-450 Enzyme SystemDirected Molecular EvolutionGene LibraryMutagenesisMutationPeptide HydrolasesProtein EngineeringCodonCytochrome P-450 Enzyme SystemoligopeptidasePeptide Hydrolasescodon mutagenesiscytochrome P450directed evolutionhalogenaseprolyl oligopeptidase

Identifiers

PMID28033708
PMCPMC5435451
OpenAlexW2564263973

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.