Evidence map›Paper›PMID 28033372›Full record

ArticlePloS one2016

Assessing Agreement between Radiomic Features Computed for Multiple CT Imaging Settings.

Lin Lu, Ross C Ehmke, Lawrence H Schwartz, Binsheng Zhao

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  13. CTFlow: Mitigating Effects of Computed Tomography Acquisition and Reconstruction with Normalizing Flows.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2023
    Article
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  20. Feature selection methods and predictive models in CT lung cancer radiomics.Journal of applied clinical medical physics · 2023
    Review

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Lin LuDepartment of Radiology, Columbia University Medical Center, New York, NY, United States of America.
Ross C EhmkeDepartment of Medicine, Columbia University Medical Center, New York, NY, United States of America.
Lawrence H SchwartzDepartment of Radiology, Columbia University Medical Center, New York, NY, United States of America.
Binsheng ZhaoDepartment of Radiology, Columbia University Medical Center, New York, NY, United States of America.

Funding

Studying measurement variability in tumor volume and volume change on MDCTR01CA149490 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHAO, BINSHENG · 2011 to 2016
$1.7M
NCI NIH HHS R01 CA149490
6 · The paper itself

Abstract

objectivesRadiomics utilizes quantitative image features (QIFs) to characterize tumor phenotype. In practice, radiological images are obtained from different vendors' equipment using various imaging acquisition settings. Our objective was to assess the inter-setting agreement of QIFs computed from CT images by varying two parameters, slice thickness and reconstruction algorithm. MATERIALS AND

methodsCT images from an IRB-approved/HIPAA-compliant study assessing thirty-two lung cancer patients were included for the analysis. Each scan's raw data were reconstructed into six imaging series using combinations of two reconstruction algorithms (Lung[L] and Standard[S]) and three slice thicknesses (1.25mm, 2.5mm and 5mm), i.e., 1.25L, 1.25S, 2.5L, 2.5S, 5L and 5S. For each imaging-setting, 89 well-defined QIFs were computed for each of the 32 tumors (one tumor per patient). The six settings led to 15 inter-setting comparisons (combinatorial pairs). To reduce QIF redundancy, hierarchical clustering was done. Concordance correlation coefficients (CCCs) were used to assess inter-setting agreement of the non-redundant feature groups. The CCC of each group was assessed by averaging CCCs of QIFs in the group.

resultsTwenty-three non-redundant feature groups were created. Across all feature groups, the best inter-setting agreements (CCCs>0.8) were 1.25S vs 2.5S, 1.25L vs 2.5L, and 2.5S vs 5S; the worst (CCCs<0.51) belonged to 1.25L vs 5S and 2.5L vs 5S. Eight of the feature groups related to size, shape, and coarse texture had an average CCC>0.8 across all imaging settings.

conclusionsVarying degrees of inter-setting disagreements of QIFs exist when features are computed from CT images reconstructed using different algorithms and slice thicknesses. Our findings highlight the importance of harmonizing imaging acquisition for obtaining consistent QIFs to study tumor imaging phonotype.

Indexed as

AlgorithmsCarcinoma, Non-Small-Cell LungHumansImage Processing, Computer-AssistedLungLung NeoplasmsTomography, X-Ray Computed

Identifiers

PMID28033372
PMCPMC5199063

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.