Evidence map›Paper›PMID 28030809›Full record

ArticleOncotarget2017

Genomic regulation of invasion by STAT3 in triple negative breast cancer.

Joy M McDaniel, Katherine E Varley, Jason Gertz, Daniel S Savic, Brian S Roberts, Sarah K Bailey, Lalita A Shevde, Ryne C Ramaker, Brittany N Lasseigne, Marie K Kirby and 12 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 2 pooled it
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 2 syntheses or guidelines pooled it, 83 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 1 country.

Joy M McDanielHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Katherine E VarleyDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT, 84112, USA.
Jason GertzDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT, 84112, USA.
Daniel S SavicHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Brian S RobertsHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Sarah K BaileyDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, 35294, USA.
Lalita A ShevdeDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, 35294, USA.
Ryne C RamakerHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Brittany N LasseigneHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Marie K KirbyHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Kimberly M NewberryHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
E Christopher PartridgeHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Angela L JonesHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Braden BooneHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Shawn E LevyHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Patsy G OliverDepartment of Radiation Oncology, University of Alabama at Birmingham, Birmingham, AL, 35294, USA.
Katherine C SextonUniversity of Alabama at Birmingham Comprehensive Cancer Center, Birmingham, AL 35294, USA.
William E GrizzleUniversity of Alabama at Birmingham Comprehensive Cancer Center, Birmingham, AL 35294, USA.
Andres ForeroUniversity of Alabama at Birmingham Comprehensive Cancer Center, Birmingham, AL 35294, USA.
Donald J BuchsbaumDepartment of Radiation Oncology, University of Alabama at Birmingham, Birmingham, AL, 35294, USA.
Sara J CooperHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Richard M MyersHudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
HudsonAlpha Institute for Biotechnology · USUniversity of Alabama at Birmingham · USHuntsman Cancer Institute · US

Funding

XRAY CRYSTALLOGRAPHYP30CA013148 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Robert S Welner · 1985 to 2026
$165.9M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008361 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YACOUBIAN, TALENE ALENE · 1992 to 2024
$16.8M
Collaborative Human Tissue NetworkUM1CA183728 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GRIZZLE, WILLIAM E. · 2014 to 2018
$3.7M
NCI NIH HHS P30 CA013148NCI NIH HHS UM1 CA183728NIGMS NIH HHS T32 GM008361
6 · The paper itself

Abstract

Breast cancer is a heterogeneous disease comprised of four molecular subtypes defined by whether the tumor-originating cells are luminal or basal epithelial cells. Breast cancers arising from the luminal mammary duct often express estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth receptor 2 (HER2). Tumors expressing ER and/or PR are treated with anti-hormonal therapies, while tumors overexpressing HER2 are targeted with monoclonal antibodies. Immunohistochemical detection of ER, PR, and HER2 receptors/proteins is a critical step in breast cancer diagnosis and guided treatment. Breast tumors that do not express these proteins are known as "triple negative breast cancer" (TNBC) and are typically basal-like. TNBCs are the most aggressive subtype, with the highest mortality rates and no targeted therapy, so there is a pressing need to identify important TNBC tumor regulators. The signal transducer and activator of transcription 3 (STAT3) transcription factor has been previously implicated as a constitutively active oncogene in TNBC. However, its direct regulatory gene targets and tumorigenic properties have not been well characterized. By integrating RNA-seq and ChIP-seq data from 2 TNBC tumors and 5 cell lines, we discovered novel gene signatures directly regulated by STAT3 that were enriched for processes involving inflammation, immunity, and invasion in TNBC. Functional analysis revealed that STAT3 has a key role regulating invasion and metastasis, a characteristic often associated with TNBC. Our findings suggest therapies targeting STAT3 may be important for preventing TNBC metastasis.

Indexed as

Cell MovementGene Expression Regulation, NeoplasticGenome, HumanTranscriptomeCell Line, TumorFemaleGene Expression ProfilingHumansNeoplasm InvasivenessNeoplasm MetastasisProtein BindingRNA InterferenceSignal TransductionSTAT3 Transcription FactorTransfectionTriple Negative Breast NeoplasmsSTAT3 protein, humanSTAT3 Transcription FactorChIP-seqinvasionRNA-seqSTAT3TNBC

Identifiers

PMID28030809
PMCPMC5352396
OpenAlexW2561249094

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.